mrcImageCTFCompensationForTiltImage
From EosPedia
mrcImageCTFCompensationForTiltImage is Eos's Command that performs CTF Correction for Tilt image.
Contents
List of option
Main option
Option | Essential/Optional | Description | Default |
---|---|---|---|
-i | Essential | Input: mrcImage(for file size only) | NULL |
-I | Essential | ROI information: ASCII | NULL |
-o | Essential | Output: mrcImage(CTF) | NULL |
-cut | Optional | Range with no compensation (The number of pixels from the center) | 6 |
-c | Optional | ConfigurationFile | NULL |
-m | Optional | Mode | 0 |
-h | Optional | Help |
-m details
Value | Description |
---|---|
0 |
-I format
cf mrcImageROIs about ROI information's format.
Execution example
Input file's data
-i image
Min Max |
0 (0, 0, 0) 255 (49, 32, 0) |
-I data
/Eos/img/ROISet0/inputnoise-0000.roi Rect 6 6 26 6 26 26 6 26 /Eos/img/ROISet0/inputnoise-0001.roi Rect 20 6 40 6 40 26 20 26 /Eos/img/ROISet0/inputnoise-0002.roi Rect 40 6 60 6 60 26 40 26 /Eos/img/ROISet0/inputnoise-0003.roi Rect 54 6 74 6 74 26 54 26 /Eos/img/ROISet0/inputnoise-0004.roi Rect 6 20 26 20 26 40 6 40 /Eos/img/ROISet0/inputnoise-0005.roi Rect 20 20 40 20 40 40 20 40 /Eos/img/ROISet0/inputnoise-0006.roi Rect 40 20 60 20 60 40 40 40 /Eos/img/ROISet0/inputnoise-0007.roi Rect 54 20 74 20 74 40 54 40 /Eos/img/ROISet0/inputnoise-0008.roi Rect 6 40 26 40 26 60 6 60 /Eos/img/ROISet0/inputnoise-0009.roi Rect 20 40 40 40 40 60 20 60 /Eos/img/ROISet0/inputnoise-0010.roi Rect 40 40 60 40 60 60 40 60 /Eos/img/ROISet0/inputnoise-0011.roi Rect 54 40 74 40 74 60 54 60 /Eos/img/ROISet0/inputnoise-0012.roi Rect 6 54 26 54 26 74 6 74 /Eos/img/ROISet0/inputnoise-0013.roi Rect 20 54 40 54 40 74 20 74 /Eos/img/ROISet0/inputnoise-0014.roi Rect 40 54 60 54 60 74 40 74 /Eos/img/ROISet0/inputnoise-0015.roi Rect 54 54 74 54 74 74 54 74
Using ROI files: Input file
Example of options only essential
Min Max |
1 (7, 7, 0) 255 (22, 7, 0) |
Option -cut
Case: cut=20
Min Max |
0.01 (7, 7, 0) 255 (25, 20, 0) |