mrcImageCenterGet

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mrcImageCenterGet is Eos's Command changes the size of mrcImage file. (Trimming)

List of option

Main option

Option Essential/Optional Description Default
-i Essential Input: mrcImage NULL
-o Essential Output: mrcImage NULL
-Nx Optional Width of x-axis 0
-Ny Optional Width of y-axis 0
-Nz Optional Width of z-axis 0
-Cx Optional Cetnter x position of extracted image. 0
-Cy Optional Cetnter y position of extracted image. 0
-Cz Optional Cetnter z position of extracted image. 0
-even Optional all dimensions of N are even.  
-m Optional Mode1 0
-M Optional Mode2 0
-h Optional Help  


-m details

Value Description
0 By Nearest
1 By Linear
2 By Cubic Convolusion


-M details

Value Description
0 Normal Image
1 Ref Image


Execution example

Input file's image

Input file

Min

Max
Mean
SD

SE

-79.707

93.0617
0.00118467
16.3973

0.016013

Option -Nx,-Ny

Case: -Nx 150,-Ny 150

*No setting the -Nz this time, because size of z is 1.
B120-N150-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-64.5759

93.0617
1.46226
17.9703

0.119802

Option -Cx,-Cy

Case: Nx 150,-Ny 150,-Cx 550 -Cy 550

B120-N150C550-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-64.5759

93.0617
1.51054
17.9468

0.119645

Option -even

Input file's image
B120-even-be-mrcImageCenterGet.png
Output file's image
B120-even-af-mrcImageCenterGet.png

Option -m, -M

Case: m=0, M=0

B120-N150C550-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-64.5759

93.0617
1.51054
17.9468

0.119645

Case: m=1

B120-m1-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-31.66

76.5183
1.5093
10.9617

0.0730782

Case: m=2

B120-m2-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-52.0282

96.0772
1.51187
15.217

0.101446

Case: M=1

B120-mM1-mrcImageCenterGet.png

Min

Max
Mean
SD

SE

-31.5983

33.7833
-0.000472438
0.43108

0.00287387

*If only essential option, the difference does not appear between the input and output files.