mrcImageCylinderSection

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mrcImageCylinderSection is Eos's Command that transforms the 3D image to a cylindrical coordinate system, and calculates the section of each r.


List of option

Main option

Option Essential/Optional Description Default
-i Essential Input: mrcImage NULL
-o Essential Output: mrcImage NULL
-angmin Optional Angle Minimum[degree] 0
-angmax Optional Angle Maximum[degree] 360
-dang Optional Delta Angle[degree] 10
-zmin Optional Z Minimum[A] 0
-zmax Optional Z Maximum[A] 100
-dz Optional Delta Z[A] 10
-rmin Optional Radius Minimum[A] 0
-rmax Optional Radius Maximum[A] 250
-dr Optional Delta Radius[A] 10
-W Optional Data are weithed by r
-c Optional ConfigurationFile NULL
-m Optional Mode 0
-h Optional Help  

-m details

Value Description
0


Execution example

Input file image

Input-mrcImageCylinderSection.png
xy-plane

Input1-mrcImageCylinderSection.png
yz-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

5.57707 (44, 26, 0)
0.0491543
0.360381

0.000522291


Example of options only essential

Outdata-mrcImageCylinderSection.png
xy-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

5.3634 (5, 0, 10)
0.0908716
0.430636

0.00418626


Option -angmin, -angmax, -dang

Case: angmin=90, angmax=180, dang=5

Outdata-ang-mrcImageCylinderSection.png
xy-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

5.35926 (10, 0, 10)
0.0920866
0.436693

0.00592402


Option -zmin, -zmax, -dz

Case: zmin=50, zmax=250, dz=5

Outdata-z-mrcImageCylinderSection.png
xy-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

3.71778 (4, 28, 10)
0.0870877
0.404747

0.002038


Option -rmin, -rmax, -dr

Case: rmin=25, rmax=125, dr=20

Outdata-r-mrcImageCylinderSection.png
xy-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

2.97146 (5, 0, 4)
0.181752
0.52102

0.0105434


Option -W

Outdata-W-mrcImageCylinderSection.png
xy-plane

Min

Max
Mean
SD

SE

0 (0, 0, 0)

536.34 (5, 0, 10)
9.0693
43.0346

0.418344