mrcImageDensityInfo

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mrcImageDensityInfo is Eos's Command that gets density information (Pixel that have positive value) of mrcImage.

List of option

Main option

Option Essential/Optional NULL Default
-i Essential Input: mrcImage NULL
-o Optional Output: ASCII NULL
-C Optional ContourLevel 10
-log Optional OutputDataFile NULL
-m Optional Mode 0
-h Optional Help  

-m details

Value Description
+1 PercentageVolume
+2 CentreOfGravity
+4 Max
+8 SD around CentreOfGravity
+16 SD around Max


Execution example

------Input file's image------

B120-mrcImageDensityInfo.png

Min

Max
Mean
SD

SE

0

65.5929
5.45036
12.3043

0.153804

------Option -o------

Output result is stored in the specified file.

------Option -m------

Case: m=1

B120.outdata-m1-mrcImageDensityInfo.png

Case: m=2

B120.outdata-m2-mrcImageDensityInfo.png

Case: m=4

B120.outdata-m4-mrcImageDensityInfo.png

Case: m=8

B120.outdata-m8-mrcImageDensityInfo.png

Case: m=16

B120.outdata-m16-mrcImageDensityInfo.png

Case: m=3

Outputting the result of m=1 and m=2.

Example:
B120.outdata-m3-mrcImageDensityInfo.png

------Option -C------

Case: C=5

B120.outdata-C5-mrcImageDensityInfo.png

Case: C=15

B120.outdata-C15-mrcImageDensityInfo.png