mrcImageModelSubfilamentsCreate

mrcImageModelSubfilamentsCreate is Eos's Command that creates filaments model.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-o	Essential	Output: mrcImage	NULL
-nx	Optional	Real length = nx * lx	71
-ny	Optional	Real length = ny * ly	71
-nz	Optional	Real length = nz * lz	100
-lx	Optional	Pixel Size[Angstrom]	5.0
-ly	Optional	Pixel Size[Angstrom]	5.0
-lz	Optional	Pixel Size[Angstrom]	5.0
-position	Optional	subfilaments position from center [A]	70
-n	Optional	n-helix	3
-dphi	Optional	rotation angle [degree]	1.395348837
-sphi	Optional	start angle [degree]	0
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

※nx, ny must be odd

-m details

Value	Description
0

Execution example

Input file's image

Min Max Mean SD SE

0 (0, 0, 0) 2.09707 (58, 41, 0) 0.00306044 0.0749793 0.00108666

Example of options only essential

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 1.98112 (31, 52, 0) 0.00741447 0.0893007 0.000125776

Option -nx, -ny, -nz

Case: nx=99, ny=99, nz=99

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 2.09707 (87, 56, 0) 0.00445187 0.0691579 5.70376e-05

Option -lx, -ly, lz

Case: lx=8, ly=8, lz=8

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 2.02889 (41, 2, 20) 0.00867218 0.0969264 0.000136516

Option -position

Case: position=35

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 2.09707 (66, 42, 0) 0.00869178 0.0977788 0.000137717

Option -n

Case: n=6

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 1.98112 (31, 52, 0) 0.0148289 0.125854 0.000177259

Option -dphi

Case: dphi=2

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 1.98112 (31, 52, 0) 0.00741588 0.0894188 0.000125942

Option -sphi

Case: sphi=90

xy-plane

yz-plane

Min Max Mean SD SE

0 (0, 0, 0) 1.98112 (18, 31, 0) 0.00741446 0.0893007 0.000125776