mrcImageOrientationSearchByHybridization

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mrcImageOrientationSearchByHybridization is Eos's Command.


List of option

Main option

Option Essential/Optional Description Default
-I Essential Input: ASCII(File List) NULL
-o Essential Output(Header) NULL
-e Essential Output(Extension) NULL
-ir Optional IncreaseRate 1
-hpn Optional HybridizationPointNumber(The number of hybridization points) 1
-ms Optional ModeOfSelection 0
-ird Optional InitialRandomData 0
-c Optional ConfigurationFile NULL
-m Optional Mode 0
-h Optional Help  


-m details

Value Description
0 create children angle file
1 do not create children angle file , create match angle file


-ir details

Value Description
1 Increase number is 45 (filenum = 10)
2 Increase number is 90 (filenum = 10)


-ms details

Value Description
0 random
1 myself (-ird)


-I format

childrenfile0
childrenfile1
.
.
.

childrenfile format
filename RotMode  phi  theta  psi
     .               .          .       .       .
     .               .          .       .       .
     .               .          .       .       .


Execution example

Input file's data

/Eos/Input-file0.txt
/Eos/Input-file1.txt


Input-file0.txt's data
/Eos/img/Input0	ZONS	0	0	0
/Eos/img/Input1	ZONS	0	45	0
/Eos/img/Input2	ZONS	0	0	45


Input-file1.txt's data
/Eos/img/Input3	ZONS	90	0	0
/Eos/img/Input4	ZONS	90	30	0
/Eos/img/Input5	ZONS	90	60	0


Example of options only essential

Output
       1.000000        0.000000        0.000000 
       0.000000        1.000000        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       0.707107        0.000000        0.707107 
       0.000000        1.000000        0.000000 
      -0.707107        0.000000        0.707107 
       0.000000        0.000000        0.000000 
       0.707107       -0.707107        0.000000 
       0.707107        0.707107        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       1.000000        0.000000        0.000000 
       0.000000        1.000000        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       1.000000       -0.000000       -0.000000 
      -0.000000        0.866025       -0.500000 
       0.000000        0.500000        0.866025 
       0.000000        0.000000        0.000000 
       1.000000       -0.000000       -0.000000 
      -0.000000        0.500000       -0.866025 
       0.000000        0.866025        0.500000 
       0.000000        0.000000        0.000000 
HybridizationPoint = 1 FileNum = 1


In case of o=/Eos/Outdata, e=txt, it outputs by filename as the following.
/Eos/Outdata-0.txt
/Eos/Outdata-1.txt
/Eos/Outdata-2.txt


Outdata-0.txt's data
/Eos/img/Input3 ZONS   0.0   0.0   0.0
/Eos/img/Input1 ZONS   0.0  45.0   0.0
/Eos/img/Input2 ZONS  45.0   0.0   0.0


Outdata-1.txt's data
/Eos/img/Input0 ZONS   0.0   0.0   0.0
/Eos/img/Input1 ZONS   0.0  45.0   0.0
/Eos/img/Input2 ZONS  45.0   0.0   0.0


Outdata-2.txt's data
/Eos/img/Input3 ZONS   0.0   0.0   0.0
/Eos/img/Input4 ZONS  90.0  30.0 270.0
/Eos/img/Input5 ZONS  90.0  60.0 270.0