mrcImagePixelDataGet

mrcImagePixelDataGetは Eos's Command that shows the pixel data.

List of option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-o	Optional	Output: ASCII	NULL
-x	Optional	Input: x	0.0
-y	Optional	Input: y	0.0
-z	Optional	Input: z	0.0
-In	Optional	Input:eosPoint	stdin
-cuda	Optional	cudaDeviceID	0
-c	Optional	ConfigurationFile	NULL
-om	Optional	Output Mode	0
-m	Optional	Interpolation Mode	0
-h	Optional	Help

-om details

Value	Description
+1	with coordinates

-m details

Setting of Interpolation method.

Value	Description
0	Nearest neighbor method
1	Bi-linear interpolation method
2	Cubic convolution method
3	Polynomial interpolation method

Execution example

------Input file's image------

Min Max Mean SD SE

-64.5759 93.0617 5.50826 20.7262 0.259078

The following file is for example of -In.

-i file's image

Min Max Mean SD SE

0 (0, 0, 0) 65535 (49, 32, 0) 5410.81 12251.4 153.143

------Example of options only essential------

The pixel data of input file is shown as the following.

------Option -o------

-o: Output to specified file.

e.g. If "outputdatafile" file is specified, it outputs the following to outputdatafile.

------Option -x,-y,-z------

Case: -x=10

Output→

Case: -x,-y=10

Output→

Case: -x,-y,-z=10

Output→

It doesn't effect -z, because z size of the image is 0.

------Option -In------

-In file is as the following.

0	0	0
44.5	31.5	0
49	32	0

Case: No other settings

Output

0.000000 0.000000 0.000000 : 0.000000
44.500000 31.500000 0.000000 : 28013.000000
49.000000 32.000000 0.000000 : 65535.000000

-o 's data

0.000000
28013.000000
65535.000000

Case: om=1

Output

0.000000 0.000000 0.000000 : 0.000000
44.500000 31.500000 0.000000 : 28013.000000
49.000000 32.000000 0.000000 : 65535.000000

-o 's data

0.000000 0.000000 0.000000 0.000000
44.500000 31.500000 0.000000 28013.000000
49.000000 32.000000 0.000000 65535.000000

The coordinates are added in Output file.

Case: m=1

Output

0.000000 0.000000 0.000000 : 0.000000
44.500000 31.500000 0.000000 : 28141.500000
49.000000 32.000000 0.000000 : 65535.000000

There is difference about the gotten data depending Interpolation method.

Case: m=2

Output

0.000000 0.000000 0.000000 : 0.000000
44.500000 31.500000 0.000000 : 26298.328125
49.000000 32.000000 0.000000 : 65535.000000

Case: m=3

Output

0.000000 0.000000 0.000000 : 0.000000
44.500000 31.500000 0.000000 : 26317704.905222
49.000000 32.000000 0.000000 : 49474638.844293