Difference between revisions of "mrcImageInverseRadonTransform"

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(Created page with "'''mrcImageInverseRadonTransform''' is Eos's Command that performs Inverse Radon Transform. == List of option == === Main option === <table border="1"> <tr>...")
 
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Latest revision as of 03:47, 25 July 2014

mrcImageInverseRadonTransform is Eos's Command that performs Inverse Radon Transform.


List of option

Main option

Option Essential/Optional Description Default
-i Essential Input: mrcImage(Radon) NULL
-o Essential Output: mrcImage NULL
-Rmax Optional Input: Rmax 1.0
-Rmin Optional Input: Rmin 1.0
-bpm Optional BackProjection Mode 1
-T Optional Threshold 1
-c Optional ConfigurationFile NULL
-m Optional Mode 0
-h Optional Help 　

-m details

Value Description
0

-bpm details

Value Description
1 SimpleBackProjection
2 WeightedBackProjection
3 RWeightedBackProjectioni (-Rmax, -Rmin)
4 NearestCountRWeightedBackProjection (-Rmax, -Rmin)
5 WeightedCountRWeightedBackProjection (-Rmax, -Rmin, -T)
6 SimpleBackProjectionRWeight (-Rmax, -Rmin)


Execution example

Input file data

Input-121P-radon.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

solid(Level: 0)
(1, 1, 1)
(1, 0, 0)

90

Size

モード
Min
Max
Mean
SD

SE

( 100, 6, 12)

mrcFloatRadonImage
0 (0, 0, 0)
548332 (43, 5, 5)
110585
157847

1860.25


before Radon transform file's data
Input2-121P.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 236)
(1, 1, 1)
(1, 0, 0)

0
Input3-121P.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 236)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

0 (0, 0, 0)

3500.79 (49, 53, 30)
11.0585
118.123

0.118123


Example of options only essential

Outdata-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 2.57e+07)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 2.57e+07)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

2.70513e+06 (99, 0, 18)

3.08546e+07 (46, 53, 54)
9.04412e+06
4.59295e+06

4592.95


Option -bpm

bpm=2

Outdata-bpm2-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 147432)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm2-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 147432)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

0 (0, 0, 0)

548332 (43, 5, 5)
110585
157847

1860.25


Case: bpm=3

Case: No other settings
Outdata-bpm3-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 11225)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm3-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 11225)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-25501.4 (58, 57, 50)

25807.4 (33, 56, 47)
18.921
4069.39

4.06939


Case: Rmin=0.1, Rmax=0.5
Outdata-bpm3RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 17078)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm3RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 17078)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-35554.3 (41, 46, 60)

42895.3 (43, 63, 56)
71.5918
6441.25

6.44125


Case: bpm=4

Case: No other settings
Outdata-bpm4-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 39203)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm4-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 39203)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-4.38318e+06 (44, 51, 0)

7.95502e+06 (53, 48, 52)
98305.6
1.27742e+06

1277.42


Case: Rmin=0.1, Rmax=0.5
Outdata-bpm4RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 5543168)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm4RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 5543168)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-4.30597e+06 (44, 51, 0)

7.79371e+06 (52, 47, 52)
98305.6
1.27414e+06

1274.14


Case: bpm=5

Case: No other settings
Outdata-bpm5-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 4347459)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm5-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 4347459)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-2.47747e+06 (44, 51, 0)

6.61758e+06 (50, 56, 55)
119547
875859

875.859


Case: Rmin=0.1, Rmax=0.5
Outdata-bpm5RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 4345185)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm5RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 4345185)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-2.40589e+06 (44, 51, 0)

6.43175e+06 (51, 47, 52)
119547
871588

871.588


Case: T=0.5
Outdata-bpm5T-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 2.57e+07)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm5T-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 2.57e+07)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

2.70513e+06 (99, 0, 18)

3.08546e+07 (46, 53, 54)
9.04412e+06
4.59295e+06

4592.95


Case: bpm=6

Case: No other settings
Outdata-bpm6-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 279548)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm6-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 279548)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-358661 (39, 64, 0)

596169 (53, 48, 52)
4.82695e-06
80685.1

80.6851


Case: Rmin=0.1, Rmax=0.5
Outdata-bpm6RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 253658)
(1, 1, 1)
(1, 0, 0)

0
Outdata1-bpm6RminRmax-mrcImageInverseRadonTransform.png

Used Tool

Style
Boxel Size
Rotation Axis

Angle

Chimera

surface(Level: 253658)
(1, 1, 1)
(1, 0, 0)

90

Min

Max
Mean
SD

SE

-195434 (41, 45, 1)

477868 (53, 48, 52)
4.01732e-05
66425

66.425
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