Difference between revisions of "mrcRefImagexaFit"
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Latest revision as of 23:39, 6 August 2014
mrcRefImagexaFit is Eos's Command.
Contents
List of option
Main option
| Option | Essential/Optional | Description | Default |
|---|---|---|---|
| -i | Essential | Input: mrcImage | NULL |
| -o | Essential | Output: mrcImage | NULL |
| -r | Optional | Reference: mrcImage | NULL |
| -ix | Optional | Initial x[pixel] | NULL |
| -ia | Optional | Initial alpha[degree] | 0 |
| -dy | Optional | Delta y | 10 |
| -xrange | Optional | x range to search[pixel] | 3 |
| -arange | Optional | alpha range to search[degree] | 2 |
| -v | Optional | Value of Peak Pixel(For mode2) | 1 |
| -c | Optional | ConfigurationFile | NULL |
| -m | Optional | Mode | 0 |
| -M | Optional | Mode2 | 0 |
| -h | Optional | Help |
-m details
| Value | Description |
|---|---|
| 0 | not normalize |
| 1 | normalize |
| 2 | Convert file to peak image. |
| 3 | Convert file to peak and alpha image |
-M details
| Value | Description |
|---|---|
| 0 | Filament is black or white. |
| 1 | Filament is black. |
| 2 | Filament is white. |
Execution example
Input file's image
 |
Min Max |
-1.00808 (6, 8, 69) 15 (8, 0, 0) |
Reference file image
 |
Min Max |
-1.12463 (4, 0, 62) 15 (8, 0, 0) |
Example of options only essential
 |
Min Max |
0 (0, 0, 0) 26 (0, 12, 0) |
Option -dy
Case: dy=1
 |
Min Max |
0 (0, 0, 0) 26 (0, 12, 0) |
