mrcImageFeatureExtraction

mrcImageFeatureExtraction is Eos's Command that that performs extraction of the feature value(kind of 30 in current) of the image.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-o	Essential	Output: mrcImage	NULL
-cr	Optional	Co-Occurrence radius	1
-ct	Optional	Co-Occurrence theta	0
-rt	Optional	RunLength theta	0
-rd	Optional	RunLength devision	4
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-o format

行	Description
0	densityhistgram average
1	densityhistgram variance
2	densityhistgram skewness
3	densityhistgram kurtosis
4	densityhistgram contrast
5	densityhistgram energy
6	densityhistgram entropy
7	co-occurrence anguler second moment
8	co-occurrence contrast
9	co-occurrence correlation
10	co-occurrence sum of square: variance
11	co-occurrence inverse difference moment
12	co-occurrence sum average
13	co-occurrence sum variance
14	co-occurrence sum entropy
15	co-occurrence entropy
16	co-occurrence difference variance
17	co-occurrence difference entropy
18	co-occurrence information measure of correlation 1
19	co-occurrence information measure of correlation 2
20	co-occurrence maximal correlation coefficient
21	difference statistics contrast
22	difference statistics anguler second moment
23	difference statistics entropy
24	difference statistics mean
25	runlength short runs emphasis
26	runlength long runs emphasis
27	runlength gray level nonuniformity
28	runlength run length nonuniformity
29	runlength run percentage

Execution example

Input file image

Min Max Mean SD SE

-18651.7 (10, 1, 0) 52942.7 (24, 39, 0) 7214.87 10067.6 125.845

Example of options only essential

Output

91.996563  
1295.891863  
0.776016  
3.386222  
9759.259375  
0.008844  
2.132293  
0.029652
2.924688
0.677156
4.529570
0.500184
10.848437
15.193591
1.155461
1.696806
1.225738
0.622819
-0.144452
0.485025
0.993531
2.924688
0.273089
0.622819
1.303438
0.491227
68.861789
523.786401
310.082040
0.211406

Output data by using mrcImageMakeDump

0 0 91.9966 
1 0 1295.89 
2 0 0.776016 
3 0 3.38622 
4 0 9759.26 
5 0 0.00884414 
6 0 2.13229 
7 0 0.0296521 
8 0 2.92469 
9 0 0.677156 
10 0 4.52957 
11 0 0.500184 
12 0 10.8484 
13 0 15.1936 
14 0 1.15546 
15 0 1.69681 
16 0 1.22574 
17 0 0.622819 
18 0 -0.144452 
19 0 0.485025 
20 0 0.993531 
21 0 2.92469 
22 0 0.273089 
23 0 0.622819 
24 0 1.30344 
25 0 0.491227 
26 0 68.8618 
27 0 523.786 
28 0 310.082 
29 0 0.211406 

Option -cr

Case: cr=2

Output data by using mrcImageMakeDump

0 0 91.9966 
1 0 1295.89 
2 0 0.776016 
3 0 3.38622 
4 0 9759.26 
5 0 0.00884414 
6 0 2.13229 
7 0 0.0281689 
8 0 3.50906 
9 0 0.612649 
10 0 4.52957 
11 0 0.474789 
12 0 10.8484 
13 0 14.6092 
14 0 1.15028 
15 0 1.72495 
16 0 1.47398 
17 0 0.654255 
18 0 -0.115791 
19 0 0.436992 
20 0 0.937231 
21 0 3.50906 
22 0 0.259241 
23 0 0.654255 
24 0 1.42656 
25 0 0.491227 
26 0 68.8618 
27 0 523.786 
28 0 310.082 
29 0 0.211406 

Option -ct

Case: ct=10

Output data by using mrcImageMakeDump

0 0 91.9966 
1 0 1295.89 
2 0 0.776016 
3 0 3.38622 
4 0 9759.26 
5 0 0.00884414 
6 0 2.13229 
7 0 0.145147 
8 0 0 
9 0 1 
10 0 4.52957 
11 0 1 
12 0 10.8484 
13 0 18.1183 
14 0 0.915479 
15 0 0.915479 
16 0 0 
17 0 -0 
18 0 -0.988124 
19 0 0.916365 
20 0 1 
21 0 0 
22 0 1 
23 0 -0 
24 0 0 
25 0 0.491227 
26 0 68.8618 
27 0 523.786 
28 0 310.082 
29 0 0.211406 

Option -rt

Case: rt=1

Output data by using mrcImageMakeDump

0 0 91.9966 
1 0 1295.89 
2 0 0.776016 
3 0 3.38622 
4 0 9759.26 
5 0 0.00884414 
6 0 2.13229 
7 0 0.0296521 
8 0 2.92469 
9 0 0.677156 
10 0 4.52957 
11 0 0.500184 
12 0 10.8484 
13 0 15.1936 
14 0 1.15546 
15 0 1.69681 
16 0 1.22574 
17 0 0.622819 
18 0 -0.144452 
19 0 0.485025 
20 0 0.993531 
21 0 2.92469 
22 0 0.273089 
23 0 0.622819 
24 0 1.30344 
25 0 0.491227 
26 0 68.8618 
27 0 523.786 
28 0 310.082 
29 0 0.211406 

Option -rt

Case: rt=1

Output data by using mrcImageMakeDump

 
0 0 91.9966 
1 0 1295.89 
2 0 0.776016 
3 0 3.38622 
4 0 9759.26 
5 0 0.00884414 
6 0 2.13229 
7 0 0.0296521 
8 0 2.92469 
9 0 0.677156 
10 0 4.52957 
11 0 0.500184 
12 0 10.8484 
13 0 15.1936 
14 0 1.15546 
15 0 1.69681 
16 0 1.22574 
17 0 0.622819 
18 0 -0.144452 
19 0 0.485025 
20 0 0.993531 
21 0 2.92469 
22 0 0.273089 
23 0 0.622819 
24 0 1.30344 
25 0 0.00015625 
26 0 6400 
27 0 80 
28 0 80 
29 0 0.0125