mrcRadon2Dto3D

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mrcRadon2Dto3D is Eos's Command that transforms from 2D Radon Image set to 3D Radon Image.


List of option

Main option

Option Essential/Optional Description Default
-I Essential Input: ASCII(File List) NULL
-Ib Optional InputDataFileListBefore NULL
-ib Optional InputDataFileBeforeData: mrcImageRadon3D NULL
-iwb Optional InputWeightDataFileBeforeData: mrcImageRadon3D NULL
-o Essential Output: mrcImage(radon3D) NULL
-ow Essential Output: mrcImage(weight) NULL
-dp Essential Input: deltaP 2.0
-dtheta Essential Input: deltaTheta 1
-dphi Essential Input: deltaPhi 1
-T Optional Threshold 1.0
-InterpolationMode Optional Interpolation Mode 0
-m Optional Radon2Dto3D Intepolation Mode 0
-h Optional Help  


-InterpolationMode details

Setting of Interpolation method

Value Description
0 Nearest neighbor method
1 Bi-linear interpolation method
2 Cubic convolution method
3 Polynomial interpolation method


-m details

Value Description
0 NearestNeighbor
1 HigherOrder (-T)

-I format

2DRadonfilename RotMode Rot1 Rot2 Rot3
               .                      .           .       .       .
               .                      .           .       .       .
               .                      .           .       .       .

Execution example

Input file data

/Eos/2DRadonSet0/Set0.mrc ZOYS 0 0 0
/Eos/2DRadonSet0/Set1.mrc ZOYS 0 45 0
/Eos/2DRadonSet0/Set2.mrc ZOYS 0 90 0

...

/Eos/2DRadonSet0/Set8.mrc ZOYS 0 360 0
/Eos/2DRadonSet0/Set9.mrc ZOYS 45 0 0
/Eos/2DRadonSet0/Set10.mrc ZOYS 45 90 0

...

/Eos/2DRadonSet0/Set17.mrc ZOYS 45 360 0
/Eos/2DRadonSet0/Set18.mrc ZOYS 90 0 0
/Eos/2DRadonSet0/Set19.mrc ZOYS 90 90 0

...

/Eos/2DRadonSet0/Set78.mrc ZOYS 360 270 0
/Eos/2DRadonSet0/Set79.mrc ZOYS 360 315 0
/Eos/2DRadonSet0/Set80.mrc ZOYS 360 360 0


Example of options only essential

Case: dp=2, dtheta=1, dphi=1

-o 's image

Outdata-mrcRadon2Dto3D.png
xy-plane

Outdata1-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

-2.57165 (24, 86, 135)

2746.57 (15, 90, 6)
82.8658
360.577

0.283296

-ow 's image

Outdata2-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

0 (0, 2, 1)

180 (0, 0, 90)
2.79444
16.1952

0.0127241

Case: dp=4, dtheta=2, dphi=2

-o 's image

Outdata3-mrcRadon2Dto3D.png
xy-plane

Outdata4-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

-0.158943 (0, 66, 169)

2536.8 (5, 59, 0)
217.308
556.358

1.26184

-ow 's image

Outdata5-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

0 (0, 2, 1)

1260 (11, 0, 0)
19.1204
66.4953

0.150814


Option -m

Case: m=1, dp=2, dtheta=1, dphi=1

Case: No other settings
-o's image

Outdata-m-mrcRadon2Dto3D.png
xy-plane

Outdata1-m-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

-2.57166 (24, 86, 136)

2746.57 (15, 91, 6)
172.326
504.539

0.396404

-ow 's image

Outdata2-m-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

0 (0, 3, 1)

156 (0, 0, 0)
2.98641
10.0724

0.0079136

Case: T=0.3
-o's image

Outdata-T-mrcRadon2Dto3D.png
xy-plane

Outdata1-T-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

-2.57165 (24, 86, 135)

2746.57 (15, 91, 6)
68.1399
327.812

0.257553

-ow 's image

Outdata2-T-mrcRadon2Dto3D.png
yz-plane

Min

Max
Mean
SD

SE

0 (0, 90, 0)

156 (0, 0, 0)
1.5178
9.05289

0.00711262