llExtractWithLayerSeparationCtrlFileCreate

llExtractWithLayerSeparationCtrlFileCreate is Eos's Command.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Optional	Input: llData	NULL
-o	Optional	Output: ASCII	stdout
-t	Essential	Turn	-13
-u	Essential	Unit	28
-N	Optional	Helix	1
-dY	Optional	Position of the 1st layer line: [Pixel]	3
-truePitch	Essential	truePitch: [A]	770
-rMax	Essential	rMax: [A]	50
-RMax	Optional	RMax: [A]	0.1
-RZMax	Optional	RZMax: [A]	0.1
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-m details

Value	Description
0

Execution example

Input file image

by mrcFFTExpression(m=1)

Whole area

Around center

Size Mode Length Min Max Mean SD SE

( 512, 1146, 1) mrcComplexFloatFT ( 2.000, 2.000, 0.000) 4.08519e-10 (257, 572, 0) 0.109661 (0, 0, 0) 0.00909953 0.00776913 1.01425e-05

Case: Options only essential

Case: t=-13, u=28, truePitch=364, rMax=50

LengthY     2292.000000 [A] = LengthY 1146 [Pixel] x PixelSize        2.000000 [A/Pixel]
Final CalculatedY         6.296703
      CalculatedY                6  
      Error[Pixel]             -54  
36 50.000000 0.100000 0.500000
0 0 3 0 28 -28 
1 6 2 -13 15 
2 12 3 2 -26 30 
3 18 2 -11 17 
4 24 3 4 -24 32 
5 30 2 -9 19 
6 36 2 6 -22 
7 42 2 -7 21 
8 48 2 8 -20 
9 54 3 -5 23 -33 
10 60 2 10 -18 
11 66 3 -3 25 -31 
12 72 2 12 -16 
13 78 3 -1 27 -29 
14 84 2 14 -14 
15 90 3 1 -27 29 
16 96 2 -12 16 
17 102 3 3 -25 31 
18 108 2 -10 18 
19 114 3 5 -23 33 
20 120 2 -8 20 
21 126 2 7 -21 
22 132 2 -6 22 
23 138 2 9 -19 
24 144 3 -4 24 -32 
25 150 2 11 -17 
26 156 3 -2 26 -30 
27 162 2 13 -15 
28 168 3 0 28 -28 
29 174 2 -13 15 
30 180 3 2 -26 30 
31 186 2 -11 17 
32 192 3 4 -24 32 
33 198 2 -9 19 
34 204 2 6 -22 
35 210 2 -7 21