View source for mrcImage3DHighResoEmphasis

'''mrcImage3DHighResoEmphasis''' is [[Eos]]'s [[Command]] that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with the -A, -B. It is a [[Band-Pass Filter]] is basically, it can also be [[Low-Pass Filter]] or [[High-Pass Filter]] by using -L and -H.


== List of option ==
=== Main option ===
		<table border="1">
			<tr> 
				<th>Option</th> 
				<th>Essential/Optional</th> 
				<th>Description</th> 
				<th>Default</th> 
			</tr> 
			<tr> 
				<td>-i</td> 
				<td>Essential</td> 
				<td>Input: [[mrcImage]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-o</td> 
				<td>Essential</td> 
				<td>Output: [[mrcImage]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-L</td> 
				<td>Optional</td> 
				<td>Low threshold to modify</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-H</td> 
				<td>Optional</td> 
				<td>High threshold to modify</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-A</td> 
				<td>Optional</td> 
				<td>A value</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-B</td> 
				<td>Optional</td> 
				<td>B value</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-c</td> 
				<td>Optional</td> 
				<td>ConfigurationFile</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-m</td> 
				<td>Optional</td> 
				<td>Mode</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-h</td> 
				<td>Optional</td> 
				<td>Help</td> 
				<td>　</td> 
			</tr> 
		</table> 

===Algorithm===
<pre>
R<L data*exp(A*L+B*L*L)
L<R<H data*exp(A*R+B*R*R) 
R>H data*exp(A*H+B*H*H) 
</pre>

=== -m details ===
		<table border="1">
			<tr> 
				<th>Value</th> 
				<th>Description</th> 
			</tr> 
			<tr> 
				<td>0</td> 
				<td></td> 
			</tr> 
		</table> 


== Execution example ==
===[[Media:1VOM.mrc | Input file]]'s image===
	<table> 
		<tr> 
			<td><p align="Center">[[File:Input-1VOM.png]]<br>
				xy-plane<br></p> 
			</td> 
			<td><p align="Center">[[File:Input1-1VOM.png]]<br>
				yz-plane<br></p> 
			</td> 
			<td><p align="left">Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">0 (0, 0, 0)<br> 
				3398.12 (23, 55, 41)<br> 
				72.129<br> 
				294.805<br> 
				0.368507<br></p> 
			</td> 
		</tr> 
	</table> 


=== Example of options only essential ===
	<table> 
		<tr> 
			<td><p align="Center">[[File:Outdata-mrcImage3DHighResoEmphasis.png]]<br>
				xy-plane<br></p> 
			</td> 
			<td><p align="Center">[[File:Outdata1-mrcImage3DHighResoEmphasis.png]]<br>
				yz-plane<br></p> 
			</td> 
			<td><p align="left">Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">-0.00046875 (58, 75, 33)<br> 
				3398.12 (23, 55, 41)<br> 
				72.129<br> 
				294.805<br> 
				0.368507<br></p> 
			</td> 
		</tr> 
	</table> 

<div>Image does not change almost by default.</div>


=== Option -A, -L, -H===
====Case: A=1, L=0.1, H=0.3==== 
	<table> 
		<tr> 
			<td><p align="Center">[[File:Outdata-LHA-mrcImage3DHighResoEmphasis.png]]<br>
				xy-plane<br></p> 
			</td> 
			<td><p align="Center">[[File:Outdata1-LHA-mrcImage3DHighResoEmphasis.png]]<br>
				yz-plane<br></p> 
			</td> 
			<td><p align="left">Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">-217.7 (36, 72, 42)<br> 
				4277.33 (40, 46, 44)<br> 
				79.7149<br> 
				344.594<br> 
				0.430743<br></p> 
			</td> 
		</tr> 
	</table>

<div>If set to only -A become exp-Filter.</div>


=== Option -B===
====Case: B=-1, L=0.1, H=0.3==== 
	<table> 
		<tr> 
			<td><p align="Center">[[File:Outdata-B-mrcImage3DHighResoEmphasis.png]]<br>
				xy-plane<br></p> 
			</td> 
			<td><p align="Center">[[File:Outdata1-B-mrcImage3DHighResoEmphasis.png]]<br>
				yz-plane<br></p> 
			</td> 
			<td><p align="left">Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">-24.5442 (48, 13, 56)<br> 
				3195.38 (23, 55, 41)<br> 
				71.4113<br> 
				281.872<br> 
				0.35234<br></p> 
			</td> 
		</tr> 
	</table>

<div>If set to only -B(<0) become gaussian-Filter.</div>