View source for mrcRefz1ImageCorrelation

'''mrcRefz1ImageCorrelation''' is [[Eos]]'s [[Command]].


== List of option ==
=== Main option ===
		<table border="1">
			<tr> 
				<th>Option</th> 
				<th>Essential/Optional</th> 
				<th>Description</th> 
				<th>Default</th> 
			</tr> 
			<tr> 
				<td>-i</td> 
				<td>Essential</td> 
				<td>Input: [[mrcImage]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-r</td> 
				<td>Optional</td> 
				<td>Reference: [[mrcImage]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-z</td> 
				<td>Optional</td> 
				<td>Correlation Reference file's z component</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-c</td> 
				<td>Optional</td> 
				<td>ConfigurationFile</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-m</td> 
				<td>Optional</td> 
				<td>Mode</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-h</td> 
				<td>Optional</td> 
				<td>Help</td> 
				<td>　</td> 
			</tr> 
		</table>

=== -m details ===
		<table border="1">
			<tr> 
				<th>Value</th> 
				<th>Description</th> 
			</tr> 
			<tr> 
				<td>0</td> 
				<td></td> 
			</tr> 
		</table> 


== Execution example ==
===[[Media:Input-121P1-R-P-N163.mrc | Input file]] image===
	<table> 
		<tr> 
			<td>[[File:Input-121P1-R-P-N163.png]]</td> 
			<td><p align="left">Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">-22248.5 (9, 1, 0)<br> 
				35714.5 (15, 15, 0)<br> 
				6368.88<br> 
				9145.28<br> 
				230.953<br></p> 
			</td> 
		</tr> 
	</table> 


===[[Media:Input-121P1-R-P.mrc | Reference file]] image===
	<table> 
		<tr> 
			<td><p align="center">[[File:Input-121P1-R-P.png]]<br> 
				z=156 ~ 170<br></p> 
			</td> 
			<td><p align="left">Size<br> 
				Mode<br> 
				Min<br> 
				Max<br> 
				Mean<br> 
				SD<br> 
				SE<br></p> 
			</td> 
			<td><p align="left">(        56,         28,        326)<br> 
				mrcFloatImage <br> 
				-1503.16 (14, 26, 131)<br> 
				36873.4 (28, 21, 158)<br> 
				6192.24<br> 
				6388.63<br> 
				8.93564<br></p> 
			</td> 
		</tr> 
	</table> 


=== Example of options only essential ===
<pre>
0.168226
</pre>
<div>The correlation value is low, because z=0 data is not image.</div>


=== Option -z===
====Case: z=162==== 
<pre>
0.83868
</pre>

====Case: z=163==== 
<pre>
0.869597
</pre>

====Case: z=164==== 
<pre>
0.82967
</pre>