View source for pdbFileMerge

'''pdbFileMerge''' is [[Eos]]'s [[Command]] that merges 2 [[PDB]] files to 1 [[PDB]] file.


== List of option ==
=== Main option ===
		<table border="1">
			<tr> 
				<th>Option</th> 
				<th>Essential/Optional</th> 
				<th>Description</th> 
				<th>Default</th> 
			</tr> 
			<tr> 
				<td>-i1</td> 
				<td>Essential</td> 
				<td>Input1: [[PDB]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-i2</td> 
				<td>Essential</td> 
				<td>Input2: [[PDB]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-o</td> 
				<td>Essential</td> 
				<td>Output: [[PDB]]</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-startC</td> 
				<td>Optional</td> 
				<td>start chain ID</td> 
				<td>A</td> 
			</tr> 
			<tr> 
				<td>-c</td> 
				<td>Optional</td> 
				<td>ConfigurationFile</td> 
				<td>NULL</td> 
			</tr> 
			<tr> 
				<td>-m</td> 
				<td>Optional</td> 
				<td>Mode</td> 
				<td>0</td> 
			</tr> 
			<tr> 
				<td>-h</td> 
				<td>Optional</td> 
				<td>Help</td> 
				<td>　</td> 
			</tr> 
		</table> 

=== -m details ===
		<table border="1">
			<tr> 
				<th>Value</th> 
				<th>Description</th> 
			</tr> 
			<tr> 
				<td>0</td> 
				<td></td> 
			</tr> 
		</table> 


== Execution example ==
===[[:Media:Input-121P-T2.pdb.zip|Input file1]] image===
	<table> 
		<tr> 
			<td>[[File:Input-121P-PDB2.png]]</td> 
			<td><p align="left">Gravity Centre(CA)<br> 
				Atom far from Centre(CA)<br> 
				Atom far from Centre(CA, Axis)<br> </p>
			</td> 
			<td><p align="left">6.053012e+00    2.519590e+01    1.189075e+01<br> 
				3.286664e+01 <br> 
				24.77      23.85      28.04 <br></p>
			</td> 
		</tr> 
	</table> 
<br>

===[[:Media:Input-121P-T3.pdb.zip|Input file2]] image===
	<table> 
		<tr> 
			<td>[[File:Input-121P-T3.png]]</td> 
			<td><p align="left">Gravity Centre(CA)<br> 
				Atom far from Centre(CA)<br> 
				Atom far from Centre(CA, Axis)<br> </p>
			</td> 
			<td><p align="left">5.097651e-01    1.932045e+01    1.188975e+01<br> 
				3.286711e+01 <br> 
				23.93      24.14      28.04<br> </p>
			</td> 
		</tr> 
	</table> 
<br>

=== Case: Options only essential ===
	<table> 
		<tr> 
			<td>[[File:Outdata-pdbFileMerge.png]]</td> 
			<td><p align="left">Gravity Centre(CA)<br> 
				Atom far from Centre(CA)<br> 
				Atom far from Centre(CA, Axis)<br> </p>
			</td> 
			<td><p align="left">3.281389e+00    2.225817e+01   -4.999687e-04<br> 
				3.798185e+01<br> 
				27.38      27.08      34.08<br></p>
			</td> 
	</table>
<br>