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Kinoshita: Created page with "'''imodst2mrc''' is Eos's Command. == List of option == === Main option === <..."
2014-08-20T02:36:45Z
Created page with "'''imodst2mrc''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optional</th> <..."
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'''imodst2mrc''' is [[Eos]]'s [[Command]].

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [Imod]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Optional</td>
<td>Output: [[mrcImage]](3D)</td>
<td>NULL</td>
</tr>
<tr>
<td>-O</td>
<td>Optional</td>
<td>If set, output list of [[mrcImage]](2D)</td>
<td></td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>
<div>-o takes priority than -O.</div>
<br>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td></td>
</tr>
</table>
<br>

== Execution example ==
===Input file===
<div>Use /data/imodst2mrc/test.ali at [[Download|data for test]]</div>
<br>

=== Option -o===
<table>
<tr>
<td><p align="Center">[[File:Outdata-o-imodst2mrc.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Outdata1-o-imodst2mrc.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">32770 (935, 641, 0)<br>
33223 (787, 145, 52)<br>
32871.8<br>
33.5412<br>
0.00419386<br></p>
</td>
</tr>
</table>
<br>

=== Option -O===
<div>Each Output file name: (Input file name).XXX</div>
<div>test.ali.000's image</div>
<table>
<tr>
<td>[[File:Outdata-O-imodst2mrc.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">32770 (935, 641, 0)<br>
32855 (504, 1000, 0)<br>
32800.2<br>
8.52188<br>
0.00832215<br></p>
</td>
</tr>
</table>
<br>

<div>test.ali.030's image</div>
<table>
<tr>
<td>[[File:Outdata1-O-imodst2mrc.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">32791 (614, 63, 0)<br>
33020 (52, 492, 0)<br>
32905.3<br>
18.5952<br>
0.0181593<br></p>
</td>
</tr>
</table>
<br>

<div>test.ali.060's image</div>
<table>
<tr>
<td>[[File:Outdata2-O-imodst2mrc.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">32776 (781, 1022, 0)<br>
32895 (117, 745, 0)<br>
32819.6<br>
12.697<br>
0.0123994<br></p>
</td>
</tr>
</table>
<br>

Option Essential/Optional