Kinoshita: Created page with "'''mrcImage2DProjection''' is Eos's Command that performs the Projection(2D). It is to utilize when the fibrous structure is extended in the z-axis direction. It ..."

2014-07-16T02:22:40Z

Created page with "'''mrcImage2DProjection''' is Eos's Command that performs the Projection(2D). It is to utilize when the fibrous structure is extended in the z-axis direction. It ..."

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'''mrcImage2DProjection''' is [[Eos]]'s [[Command]] that performs the [[Projection]](2D).
It is to utilize when the fibrous structure is extended in the z-axis direction.
It performs the projections along the x-axis basis.
[[lmrcRefFilamentProjection]] is called internally. Therefore note size of the x-axis(It is the magnitude of the y-axis direction is assumed), z-axis are the number of pixels in the x-axis, y-axis direction.

== List of option ==
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]](3D)</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[mrcImage]](2D)</td>
<td>NULL</td>
</tr>
<tr>
<td>-w</td>
<td>Optional</td>
<td>Omega</td>
<td>0</td>
</tr>
<tr>
<td>-p</td>
<td>Optional</td>
<td>Phi</td>
<td>0</td>
</tr>
<tr>
<td>-a</td>
<td>Optional</td>
<td>Alpha</td>
<td>0</td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>

== Execution example ==
===[[Media:Input-ThickFilaments0.mrc | Input file]]'s data===

<pre>
N : ( 69, 69, 100)
Mode : 2 mrcFloatImage
StartN : ( 0, 0, 0)
M : ( 1, 1, 1)
Length : ( 10.000, 10.000, 10.000)
A,B,G : ( 90.00, 90.00, 90.00)
C,R,S : ( 1, 2, 3)
Min,Max,Mean : ( 0, 1.44, 0.00306)
</pre>

=== Example of options only essential ===
<table>
<tr>
<td>[[File:Outdata-mrcImage2DProjection.png]]</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>-0.787823 (24, 61, 0) 
3.86799 (20, 24, 0) 
0.207849 
0.552886 
0.00660825 
</td>
</tr>
</table>

=== Option -w===
====w=15====
<table>
<tr>
<td>[[File:Outdata-w-mrcImage2DProjection.png]]</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>-0.840167 (22, 38, 0) 
3.50401 (20, 47, 0) 
0.296917 
0.622977 
0.00889967 
</td>
</tr>
</table>

=== Option -p===
====p=15====
<table>
<tr>
<td>[[File:Outdata-p-mrcImage2DProjection.png]]</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>-0.611925 (45, 54, 0) 
4.39429 (20, 61, 0) 
0.207956 
0.579118 
0.00692178 
</td>
</tr>
</table>

=== Option -a===
====a=15====
<table>
<tr>
<td>[[File:Outdata-a-mrcImage2DProjection.png]]</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>-1.07764 (30, 22, 0) 
4.35892 (28, 31, 0) 
0.202807 
0.547871 
0.00646751 
</td>
</tr>
</table>

mrcImage2DProjection - Revision history

Kinoshita: Created page with "'''mrcImage2DProjection''' is Eos's Command that performs the Projection(2D). It is to utilize when the fibrous structure is extended in the z-axis direction. It ..."