Kinoshita at 05:09, 6 August 2014

2014-08-06T05:09:21Z

Kinoshita: Created page with "'''mrcImage3DHighResoEmphasis''' is Eos's Command that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with..."

2014-07-16T03:05:59Z

Created page with "'''mrcImage3DHighResoEmphasis''' is Eos's Command that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with..."

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'''mrcImage3DHighResoEmphasis''' is [[Eos]]'s [[Command]] that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with the -A, -B. It is a [[Band pass filter]] is basically, it can also be [[Low-pass filter]] or [[High-pass filter]] by using -L and -H.

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-L</td>
<td>Optional</td>
<td>Low threshold to modify</td>
<td>0</td>
</tr>
<tr>
<td>-H</td>
<td>Optional</td>
<td>High threshold to modify</td>
<td>0</td>
</tr>
<tr>
<td>-A</td>
<td>Optional</td>
<td>A value</td>
<td>0</td>
</tr>
<tr>
<td>-B</td>
<td>Optional</td>
<td>B value</td>
<td>0</td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>

===Algorithm===
<pre>
R<L data*exp(A*L+B*L*L)
L<R<H data*exp(A*R+B*R*R)
R>H data*exp(A*H+B*H*H)
</pre>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td></td>
</tr>
</table>

== Execution example ==
===[[Media:1VOM.mrc | Input file]]'s image===
<table>
<tr>
<td><p align="Center">[[File:Input-1VOM.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Input1-1VOM.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">0 (0, 0, 0)<br>
3398.12 (23, 55, 41)<br>
72.129<br>
294.805<br>
0.368507<br></p>
</td>
</tr>
</table>

=== Example of options only essential ===
<table>
<tr>
<td><p align="Center">[[File:Outdata-mrcImage3DHighResoEmphasis.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Outdata1-mrcImage3DHighResoEmphasis.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-0.00046875 (58, 75, 33)<br>
3398.12 (23, 55, 41)<br>
72.129<br>
294.805<br>
0.368507<br></p>
</td>
</tr>
</table>

<div>Image does not change almost by default.</div>

=== Option -A, -L, -H===
====Case: A=1, L=0.1, H=0.3====
<table>
<tr>
<td><p align="Center">[[File:Outdata-LHA-mrcImage3DHighResoEmphasis.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Outdata1-LHA-mrcImage3DHighResoEmphasis.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-217.7 (36, 72, 42)<br>
4277.33 (40, 46, 44)<br>
79.7149<br>
344.594<br>
0.430743<br></p>
</td>
</tr>
</table>

<div>If set to only -A become exp-Filter.</div>

=== Option -B===
====Case: B=-1, L=0.1, H=0.3====
<table>
<tr>
<td><p align="Center">[[File:Outdata-B-mrcImage3DHighResoEmphasis.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Outdata1-B-mrcImage3DHighResoEmphasis.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-24.5442 (48, 13, 56)<br>
3195.38 (23, 55, 41)<br>
71.4113<br>
281.872<br>
0.35234<br></p>
</td>
</tr>
</table>

<div>If set to only -B(<0) become gaussian-Filter.</div>

← Older revision		Revision as of 05:09, 6 August 2014
Line 1:		Line 1:
−	'''mrcImage3DHighResoEmphasis''' is [[Eos]]'s [[Command]] that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with the -A, -B. It is a [[Band ~~pass filter~~]] is basically, it can also be [[Low-~~pass filter~~]] or [[High-~~pass filter~~]] by using -L and -H.	+	'''mrcImage3DHighResoEmphasis''' is [[Eos]]'s [[Command]] that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with the -A, -B. It is a [[Band-Pass Filter]] is basically, it can also be [[Low-Pass Filter]] or [[High-Pass Filter]] by using -L and -H.

mrcImage3DHighResoEmphasis - Revision history

Kinoshita at 05:09, 6 August 2014

Kinoshita: Created page with "'''mrcImage3DHighResoEmphasis''' is Eos's Command that multiplies the high frequency emphasis filter(3D-capable). It is possible to freely set the filter function with..."