mrcImageCylinderSection - Revision history

Kinoshita at 23:41, 23 July 2014

2014-07-23T23:41:27Z

Kinoshita at 23:37, 23 July 2014

2014-07-23T23:37:23Z

Kinoshita: Created page with "'''mrcImageCylinderSection''' is円筒座標系に変換して、r毎のセクションをもとめる Eos's Command. == List of option == === Main option ===
2014-07-23T23:32:59Z

Created page with "'''mrcImageCylinderSection''' is円筒座標系に変換して、r毎のセクションをもとめる Eos's Command. == List of option == === Main option === <tab..."

New page
'''mrcImageCylinderSection''' is円筒座標系に変換して、r毎のセクションをもとめる [[Eos]]'s [[Command]].

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-angmin</td>
<td>Optional</td>
<td>角度の最小値: [degree]</td>
<td>0</td>
</tr>
<tr>
<td>-angmax</td>
<td>Optional</td>
<td>角度の最大値: [degree]</td>
<td>360</td>
</tr>
<tr>
<td>-dang</td>
<td>Optional</td>
<td>角度の増分値: [degree]</td>
<td>10</td>
</tr>
<tr>
<td>-zmin</td>
<td>Optional</td>
<td>Zの最小値: [A]</td>
<td>0</td>
</tr>
<tr>
<td>-zmax</td>
<td>Optional</td>
<td>Zの最大値: [A]</td>
<td>100</td>
</tr>
<tr>
<td>-dz</td>
<td>Optional</td>
<td>Zの増分値: [A]</td>
<td>10</td>
</tr>
<tr>
<td>-rmin</td>
<td>Optional</td>
<td>半径の最小値: [A]</td>
<td>0</td>
</tr>
<tr>
<td>-rmax</td>
<td>Optional</td>
<td>半径の最大値: [A]</td>
<td>250</td>
</tr>
<tr>
<td>-dr</td>
<td>Optional</td>
<td>半径の増分値: [A]</td>
<td>10</td>
</tr>
<tr>
<td>-W</td>
<td>Optional</td>
<td>Data are weithed by r</td>
<td></td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td></td>
</tr>
</table>

== Execution example ==
===[[Media:Input-ThickFilaments2.mrc | Input file]] image===
<table>
<tr>
<td>[[File:Input-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>[[File:Input1-mrcImageCylinderSection.png]] 
yz-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
5.57707 (44, 26, 0) 
0.0491543 
0.360381 
0.000522291 
</td>
</tr>
</table>

=== Example of options only essential ===
<table>
<tr>
<td>[[File:Outdata-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
5.3634 (5, 0, 10) 
0.0908716 
0.430636 
0.00418626 
</td>
</tr>
</table>

=== Option -angmin, -angmax, -dang===
====angmin=90, angmax=180, dang=5====
<table>
<tr>
<td>[[File:Outdata-ang-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
5.35926 (10, 0, 10) 
0.0920866 
0.436693 
0.00592402 
</td>
</tr>
</table>

=== Option -zmin, -zmax, -dz===
====zmin=50, zmax=250, dz=5====
<table>
<tr>
<td>[[File:Outdata-z-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
3.71778 (4, 28, 10) 
0.0870877 
0.404747 
0.002038 
</td>
</tr>
</table>

=== Option -rmin, -rmax, -dr===
====rmin=25, rmax=125, dr=20====
<table>
<tr>
<td>[[File:Outdata-r-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
2.97146 (5, 0, 4) 
0.181752 
0.52102 
0.0105434 
</td>
</tr>
</table>

=== Option -W===
<table>
<tr>
<td>[[File:Outdata-W-mrcImageCylinderSection.png]] 
xy-plane 
</td>
<td>Min 
Max 
Mean 
SD 
SE 
</td>
<td>0 (0, 0, 0) 
536.34 (5, 0, 10) 
9.0693 
43.0346 
0.418344 
</td>
</tr>
</table>

← Older revision		Revision as of 23:41, 23 July 2014
Line 1:		Line 1:
−	'''mrcImageCylinderSection''' is [[Eos]]'s [[Command]] that ~~円筒座標系に変換して、r毎のセクションをもとめる~~	+	'''mrcImageCylinderSection''' is [[Eos]]'s [[Command]] that transforms the 3D image to a cylindrical coordinate system, and calculates the section of each r.

@@ Line 1: / Line 1: @@
-'''mrcImageCylinderSection''' is円筒座標系に変換して、r毎のセクションをもとめる [[Eos]]'s [[Command]].
+'''mrcImageCylinderSection''' is [[Eos]]'s [[Command]] that 円筒座標系に変換して、r毎のセクションをもとめる
@@ Line 26: / Line 26: @@
 				<td>-angmin</td>
 				<td>Optional</td>
-				<td>角度の最小値: [degree]</td>
+				<td>Angle Minimum[degree]</td>
 				<td>0</td>
 			</tr>
@@ Line 32: / Line 32: @@
 				<td>-angmax</td>
 				<td>Optional</td>
-				<td>角度の最大値: [degree]</td>
+				<td>Angle Maximum[degree]</td>
 				<td>360</td>
 			</tr>
@@ Line 38: / Line 38: @@
 				<td>-dang</td>
 				<td>Optional</td>
-				<td>角度の増分値: [degree]</td>
+				<td>Delta Angle[degree]</td>
 				<td>10</td>
 			</tr>
@@ Line 44: / Line 44: @@
 				<td>-zmin</td>
 				<td>Optional</td>
-				<td>Zの最小値: [A]</td>
+				<td>Z Minimum[A]</td>
 				<td>0</td>
 			</tr>
@@ Line 50: / Line 50: @@
 				<td>-zmax</td>
 				<td>Optional</td>
-				<td>Zの最大値: [A]</td>
+				<td>Z Maximum[A]</td>
 				<td>100</td>
 			</tr>
@@ Line 56: / Line 56: @@
 				<td>-dz</td>
 				<td>Optional</td>
-				<td>Zの増分値: [A]</td>
+				<td>Delta Z[A]</td>
 				<td>10</td>
 			</tr>
@@ Line 62: / Line 62: @@
 				<td>-rmin</td>
 				<td>Optional</td>
-				<td>半径の最小値: [A]</td>
+				<td>Radius Minimum[A]</td>
 				<td>0</td>
 			</tr>
@@ Line 68: / Line 68: @@
 				<td>-rmax</td>
 				<td>Optional</td>
-				<td>半径の最大値: [A]</td>
+				<td>Radius Maximum[A]</td>
 				<td>250</td>
 			</tr>
@@ Line 74: / Line 74: @@
 				<td>-dr</td>
 				<td>Optional</td>
-				<td>半径の増分値: [A]</td>
+				<td>Delta Radius[A]</td>
 				<td>10</td>
 			</tr>
@@ Line 165: / Line 165: @@
 === Option -angmin, -angmax, -dang===
-====angmin=90, angmax=180, dang=5====
+====Case: angmin=90, angmax=180, dang=5====
 	<table>
 		<tr>
@@ Line 188: / Line 188: @@
 === Option -zmin, -zmax, -dz===
-====zmin=50, zmax=250, dz=5====
+====Case: zmin=50, zmax=250, dz=5====
 	<table>
 		<tr>
@@ Line 211: / Line 211: @@
 === Option -rmin, -rmax, -dr===
-====rmin=25, rmax=125, dr=20====
+====Case: rmin=25, rmax=125, dr=20====
 	<table>
 		<tr>