Kinoshita: Created page with "'''mrcImageDensityInfo''' is Eos's Command that gets density information (Pixel that have positive value) of mrcImage. == List of option == === Main option ===..."

2014-07-24T00:33:52Z

Created page with "'''mrcImageDensityInfo''' is Eos's Command that gets density information (Pixel that have positive value) of mrcImage. == List of option == === Main option ===..."

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'''mrcImageDensityInfo''' is [[Eos]]'s [[Command]] that gets density information (Pixel that have positive value) of [[mrcImage]].

== List of option ==
=== Main option ===
<table border="1">
<div align="left">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>NULL</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Optional</td>
<td>Output: [[ASCII]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-C</td>
<td>Optional</td>
<td>ContourLevel</td>
<td>10</td>
</tr>
<tr>
<td>-log</td>
<td>Optional</td>
<td>OutputDataFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</div>
</table>

=== -m details ===
<table border="1">
<div align="left">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>+1</td>
<td>PercentageVolume</td>
</tr>
<tr>
<td>+2</td>
<td>CentreOfGravity</td>
</tr>
<tr>
<td>+4</td>
<td>Max</td>
</tr>
<tr>
<td>+8</td>
<td>SD around CentreOfGravity</td>
</tr>
<tr>
<td>+16</td>
<td>SD around Max</td>
</tr>
</div>
</table>

== Execution example ==
===------Input file's image------===
<table>
<tr>
<td>[[File:B120-mrcImageDensityInfo.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">0<br>
65.5929<br>
5.45036<br>
12.3043<br>
0.153804<br></p>
</td>
</tr>
</table>

===------Option -o------===
<div>Output result is stored in the specified file.<br></div>

===------Option -m------===

====Case: m=1====
[[File:B120.outdata-m1-mrcImageDensityInfo.png]]<br>
<br>
====Case: m=2====
[[File:B120.outdata-m2-mrcImageDensityInfo.png]]<br>
<br>
====Case: m=4====
[[File:B120.outdata-m4-mrcImageDensityInfo.png]]<br>
<br>
====Case: m=8====
[[File:B120.outdata-m8-mrcImageDensityInfo.png]]<br>
<br>
====Case: m=16====
[[File:B120.outdata-m16-mrcImageDensityInfo.png]]<br>
<br>
====Case: m=3====
<div>Outputting the result of m=1 and m=2.<br>
Example: <br>
[[File:B120.outdata-m3-mrcImageDensityInfo.png]]<br>
</div>

===------Option -C------===
====Case: C=5====
[[File:B120.outdata-C5-mrcImageDensityInfo.png]]<br>
====Case: C=15====
[[File:B120.outdata-C15-mrcImageDensityInfo.png]]<br>

mrcImageDensityInfo - Revision history

Kinoshita: Created page with "'''mrcImageDensityInfo''' is Eos's Command that gets density information (Pixel that have positive value) of mrcImage. == List of option == === Main option ===..."