http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?action=history&feed=atom&title=mrcImageDensityNormalization
mrcImageDensityNormalization - Revision history
2026-05-04T15:34:08Z
Revision history for this page on the wiki
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http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageDensityNormalization&diff=4402&oldid=prev
Kinoshita at 04:01, 3 October 2014
2014-10-03T04:01:10Z
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<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 04:01, 3 October 2014</td>
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<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> <td><del class="diffchange diffchange-inline">Optional</del></td></div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> <td><ins class="diffchange diffchange-inline">Essential</ins></td></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Output: [[mrcImage]]</td></div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Output: [[mrcImage]]</td></div></td></tr>
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Kinoshita
http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageDensityNormalization&diff=1141&oldid=prev
Kinoshita: Created page with "'''mrcImageDensityNormalization''' is Eos's Command that normalizes the density. == List of option == <table border="1"> <div align="left"> <tr> <th>Opti..."
2014-07-24T00:42:41Z
<p>Created page with "'''mrcImageDensityNormalization''' is <a href="/Eos/index.php/Eos" title="Eos">Eos</a>'s <a href="/Eos/index.php/Command" title="Command">Command</a> that normalizes the density. == List of option == <table border="1"> <div align="left"> <tr> <th>Opti..."</p>
<p><b>New page</b></p><div>'''mrcImageDensityNormalization''' is [[Eos]]'s [[Command]] that normalizes the density.<br />
<br />
== List of option ==<br />
<table border="1"><br />
<div align="left"><br />
<tr><br />
<th>Option</th><br />
<th>Essential/Optional</th><br />
<th>NULL</th><br />
<th>Default</th><br />
</tr><br />
<tr><br />
<td>-i</td><br />
<td>Essential</td><br />
<td>Input: [[mrcImage]]</td><br />
<td>NULL</td><br />
</tr><br />
<tr><br />
<td>-o</td><br />
<td>Optional</td><br />
<td>Output: [[mrcImage]]</td><br />
<td>NULL</td><br />
</tr><br />
<tr><br />
<td>-V</td><br />
<td>Optional</td><br />
<td>Value</td><br />
<td>100</td><br />
</tr><br />
<tr><br />
<td>-h</td><br />
<td>Optional</td><br />
<td>Help</td><br />
<td> </td><br />
</tr><br />
</div><br />
</table><br />
<br />
<br />
== Execution example ==<br />
===------Input file's image------===<br />
<table><br />
<tr><br />
<td>[[File:B120-2-mrcImageDensityNormalization.png]]<br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">-65.0178<br><br />
94.4699<br><br />
4.85274<br><br />
20.4635<br><br />
0.255794<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Example of options only essential------===<br />
<table><br />
<tr><br />
<td>[[File:B120-2.outdata-1-mrcImageDensityNormalization.png]]<br />
<br />
<br />
[[File:B120-2.outdata-2-mrcImageDensityNormalization.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">-0.209346<br><br />
0.304177<br><br />
0.015625<br><br />
0.0658892<br><br />
0.000823614<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -V------===<br />
====Case: -V=10====<br />
<table><br />
<tr><br />
<td>[[File:B120-2.outdata-V10-1-mrcImageDensityNormalization.png]]<br />
<br />
<br />
[[File:B120-2.outdata-V10-2-mrcImageDensityNormalization.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">-0.0209346<br><br />
0.0304177<br><br />
0.0015625<br><br />
0.00658892<br><br />
8.23614e-05<br></p><br />
</td><br />
</tr><br />
</table></div>
Kinoshita