mrcImageFFTLayerLineExtraction - Revision history

Kinoshita: Created page with "'''mrcImageFFTLayerLineExtraction''' is Eos's Command. == List of option == === Main option ===

Option Essential/..."
2014-07-24T02:48:50Z

Created page with "'''mrcImageFFTLayerLineExtraction''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/..."

New page
'''mrcImageFFTLayerLineExtraction''' is [[Eos]]'s [[Command]].

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]](FFT)</td>
<td>NULL</td>
</tr>
<tr>
<td>-I</td>
<td>Optional</td>
<td>Input: [[ASCII]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[mrcImage]](FFT)</td>
<td>NULL</td>
</tr>
<tr>
<td>-turePitch</td>
<td>Optional</td>
<td>true Pitch: [A]</td>
<td>430</td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td></td>
</tr>
</table>

===-I format===
<pre>
FileName x z dY
</pre>
<div>-I option is stronger than -dY option.</div>

== Execution example ==
===[[Media:Input-B120.fft | Input file]] image===
<table>
<tr>
<td>[[File:Input-B120-FFT.png]]</td>
<td><p align="left">Size<br>
Mode<br>
Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">( 80, 80, 1)<br>
mrcComplexFloatFT <br>
0.00776821 (75, 37, 0)<br>
1684.3 (0, 0, 0)<br>
9.41977<br>
61.1799<br>
0.764749<br></p>
</td>
</tr>
</table>
<br>

=== Option -I===
<div>-I 's data</div>
<pre>
a 0 0 2

</pre>
<br>

<div>Output</div>
<pre>
x 0.000000: z 0.000000: dY 2
maxdY : 40 maxdYcheck : 40.000000
dY:2
inHeaderN.y:80, inHeaderLength.y: 2.500000
outHeaderN.y:40, outHeaderLength.y: 2.500000
</pre>
<br>

<div>-o 's image</div>
<table>
<tr>
<td>[[File:Outdata-I-mrcImageFFTLayerLineExtraction.png]]</td>
<td><p align="left">Size<br>
Mode<br>
Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">( 80, 40, 1)<br>
mrcComplexFloatFT <br>
0.00776821 (75, 18, 0)<br>
1684.3 (0, 0, 0)<br>
9.54903<br>
61.2357<br>
1.0825<br></p>
</td>
</tr>
</table>
<br>

=== Option -truePitch===
====Case: truePitch=50====

<div>Output</div>
<pre>
in dY
x 0.000000: z 0.000000: dY 4
maxdY : 20 maxdYcheck : 20.000000
dY:4
inHeaderN.y:80, inHeaderLength.y: 2.500000
outHeaderN.y:20, outHeaderLength.y: 2.500000
</pre>
<br>

<div>-o 's image</div>
<table>
<tr>
<td>[[File:Outdata-truePitch-mrcImageFFTLayerLineExtraction.png]]</td>
<td><p align="left">Size<br>
Mode<br>
Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">( 80, 20, 1)<br>
mrcComplexFloatFT <br>
0.0233105 (78, 11, 0)<br>
1684.3 (0, 0, 0)<br>
10.5245<br>
75.9939<br>
1.89985<br></p>
</td>
</tr>
</table>
<br>