mrcImageFourierNeighborCorrelation - Revision history

Kinoshita at 09:04, 28 October 2014

2014-10-28T09:04:19Z

Kinoshita: /* SN比毎のdata比較 */

2014-10-27T03:48:18Z

‎SN比毎のdata比較

Kinoshita at 03:00, 27 October 2014

2014-10-27T03:00:05Z

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Kinoshita: /* NoiseWeighted=-100, -FSCfull, -Cref */

2014-10-27T02:54:19Z

‎NoiseWeighted=-100, -FSCfull, -Cref

Kinoshita: /* Case: using -FSC and specifying files as -mask, -maskBack (vol.2) */

2014-10-27T02:12:52Z

‎Case: using -FSC and specifying files as -mask, -maskBack (vol.2)

Kinoshita: /* Case: using -FSC and specifying files as -mask, -maskBack (vol.2) */

2014-10-27T02:12:28Z

‎Case: using -FSC and specifying files as -mask, -maskBack (vol.2)

Kinoshita: /* Case: using -FSC and specifying files as -mask, -maskBack (vol.2) */

2014-10-27T02:11:33Z

‎Case: using -FSC and specifying files as -mask, -maskBack (vol.2)

Kinoshita at 01:56, 27 October 2014

2014-10-27T01:56:36Z

Kinoshita: /* Case: using -FSC and specifying files as -mask, -maskBack */

2014-10-27T01:51:17Z

‎Case: using -FSC and specifying files as -mask, -maskBack

Kinoshita: /* Input file(Padding) */

2014-10-23T06:59:59Z

‎Input file(Padding)

@@ Line 212: / Line 212: @@
 === Input file(Padding) ===
 Padding of the above file by 0 adds redundancy to the image.<br>
-This file can be created by [[Tutorial List]].<br>
+This file can be created by [[Tutorial List#mrcImage]].<br>
 	<table>
 		<tr>
@@ Line 314: / Line 314: @@
 ==== Case: using -FSC and specifying files as -mask, -maskBack ====
--mask 's file: This file can be created by [[Tutorial List]].<br>
+-mask 's file: This file can be created by [[Tutorial List#mrcImage]].<br>
 <br>
 Setting of Makefile<br>
@@ Line 344: / Line 344: @@
 <br>
--maskBack 's file: This file can be created by [[Tutorial List]].<br>
+-maskBack 's file: This file can be created by [[Tutorial List#mrcImage]].<br>
 	<table>
 		<tr>
@@ Line 605: / Line 605: @@
 In [[#Case: using -FSC and specifying files as -mask, -maskBack|above example]], The half value point of Low-Pass Filter to create mask file is 0.0125(80Å). Therefore, it is coarse almost as an ellipse.<br>
 This time prepare a mask file whose half value point is 0.05(20Å).<br>
--mask 's file: This file can be created by [[Tutorial List]].<br>
+-mask 's file: This file can be created by [[Tutorial List#mrcImage]].<br>
 <br>
 Setting of Makefile<br>
@@ Line 730: / Line 730: @@
 === Compare data with each SN ratio ===
 Compare output for input data with each different SN ratio as the following.br>
-You can perform by [[Tutorial List]] command.<br>
+You can perform by [[Tutorial List#mrcImage]] command.<br>
 <br>
 Setting of Makefile<br>

@@ Line 728: / Line 728: @@
 <br>
-=== SN比毎のdata比較 ===
+=== Compare data with each SN ratio ===
-下記のようにSN比が異なるInput fileについての結果を比較します.<br>
+Compare output for input data with each different SN ratio as the following.br>
-[[Tutorial List]]を利用したCommandでも実行できます.<br>
+You can perform by [[Tutorial List]] command.<br>
 <br>
-MakefileのSetting<br>
+Setting of Makefile<br>
 <pre>
 #### Definition ####
@@ Line 744: / Line 744: @@
 <br>
-それぞれのInput画像(パディング前)<br>
+Each input image(before padding)<br>
 <table>
 	<tr>
@@ Line 829: / Line 829: @@
 <br>
-==== [[:Media:Outdata-mrcImageFourierNeighborCorrelation.zip|Output file]]の比較 ====
+==== Compare [[:Media:Outdata-mrcImageFourierNeighborCorrelation.zip|Output file]]s ====
 <br>
@@ Line 867: / Line 867: @@
 </table>
-==== Crefが最初に0になるdata付近のOutput ====
+==== Output for around the first point as Cref=0. ====
 SN=0.3<br>
 <pre>
@@ Line 962: / Line 962: @@
 </pre>
 <br>
-dataやグラフによりSNが良くなるほど,分解能が良くなることが分かります.<br>
+It is found that the higher SN ratio is the higher the resolution is.<br>
 <br>

@@ Line 688: / Line 688: @@
 .863281   0.000000          0 FSC  -0.811947 SNR -8.962150e-01 FNCF   0.000000 FNCN   0.000000 FSCfull  -8.635308 Cref   0.000000 NoiseWeighted   0.000000
 </pre>
-intervalWidthdがデフォルトの場合でも,R=0.660156のdataまでを見えるようになりました.<br>
+Data in interval of default setting can be expressed on range of R=0.660156.<br>
 <br>
@@ Line 725: / Line 725: @@
 	</tr>
 </table>
-グラフでは最初の4点と最後の1点を除いていて表示している.<br>
+These graphs are removed the first 4 points and last 1 point.<br>
 <br>

@@ Line 635: / Line 635: @@
 <br>
--maskBack: 同じfileを使用します.<br>
+-maskBack: Use same file.<br>
 <br>

@@ Line 605: / Line 605: @@
 In [[#Case: using -FSC and specifying files as -mask, -maskBack|above example]], The half value point of Low-Pass Filter to create mask file is 0.0125(80Å). Therefore, it is coarse almost as an ellipse.<br>
 This time prepare a mask file whose half value point is 0.05(20Å).<br>
--maskのfile: このfileは[[Tutorial List]]にてCreateできます.<br>
+-mask 's file: This file can be created by [[Tutorial List]].<br>
 <br>
-Makefile内のSetting<br>
+Setting of Makefile<br>
 <pre>
 MASK_VALUE=0.05

@@ Line 603: / Line 603: @@
 ==== Case: using -FSC and specifying files as -mask, -maskBack (vol.2)====
-In [[#Case: using -FSC and specifying files as -mask, -maskBack|above example]], maskfileのCreateにてローパスFilterを掛けるときにhalf value point=0.0125(80Å)とかなり粗めにしていたために,ほとんど楕円に近い画像となっていました.<br>
+In [[#Case: using -FSC and specifying files as -mask, -maskBack|above example]], The half value point of Low-Pass Filter to create mask file is 0.0125(80Å). Therefore, it is coarse almost as an ellipse.<br>
-次はhalf value point=0.05(20Å)としてmaskfileを用意します.<br>
+This time prepare a mask file whose half value point is 0.05(20Å).<br>
 -maskのfile: このfileは[[Tutorial List]]にてCreateできます.<br>
 <br>

@@ Line 600: / Line 600: @@
 <br>
 As above, if FNC is between FNCF and FNCN, the estimate value of SNR, FSC, FSCfull is positive. Then, Cref and NoiseWeighted can be calculated as real value.<br>
 <br>

@@ Line 266: / Line 266: @@
 [[File:Outdata1-mrcImageFourierNeighborCorrelation.png]]<br>
 In the case of an image which has redundancy, FNC on high frequency area is also the high value.<br>
 <br>