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mrcImageGaussDisc - Revision history
2026-06-04T18:50:16Z
Revision history for this page on the wiki
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http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageGaussDisc&diff=1359&oldid=prev
Kinoshita: /* Case: -W=100,-H=100 */
2014-07-25T00:43:55Z
<p><span dir="auto"><span class="autocomment">Case: -W=100,-H=100</span></span></p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 00:43, 25 July 2014</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr></div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </table></div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </table></div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><div>The default of -size is <del class="diffchange diffchange-inline">1</del>. Therefore the width of x and y are 20.</div></div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><div>The default of -size is <ins class="diffchange diffchange-inline">5</ins>. Therefore the width of x and y are 20.</div></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Case: -W=100,-H=100 (with -size=1)====</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>====Case: -W=100,-H=100 (with -size=1)====</div></td></tr>
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Kinoshita
http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageGaussDisc&diff=1337&oldid=prev
Kinoshita: Created page with "'''mrcImageGaussDisc''' is Eos's Command that creates a Gauss Disc. == List of option == === Main option === <table border="1"> <div align="left"> <tr> <t..."
2014-07-25T00:09:19Z
<p>Created page with "'''mrcImageGaussDisc''' is <a href="/Eos/index.php/Eos" title="Eos">Eos</a>'s <a href="/Eos/index.php/Command" title="Command">Command</a> that creates a Gauss Disc. == List of option == === Main option === <table border="1"> <div align="left"> <tr> <t..."</p>
<p><b>New page</b></p><div>'''mrcImageGaussDisc''' is [[Eos]]'s [[Command]] that creates a Gauss Disc.<br />
<br />
== List of option ==<br />
=== Main option ===<br />
<table border="1"><br />
<div align="left"><br />
<tr><br />
<th>Option</th><br />
<th>Essential/Optional</th><br />
<th>NULL</th><br />
<th>Default</th><br />
</tr><br />
<tr><br />
<td>-o</td><br />
<td>Essential</td><br />
<td>Output: [[mrcImage]]</td><br />
<td>NULL</td><br />
</tr><br />
<tr><br />
<td>-sigmax</td><br />
<td>Optional</td><br />
<td>sigmax[A]</td><br />
<td>10</td><br />
</tr><br />
<tr><br />
<td>-sigmay</td><br />
<td>Optional</td><br />
<td>sigmay[A]</td><br />
<td>10</td><br />
</tr><br />
<tr><br />
<td>-sigma_range</td><br />
<td>Optional</td><br />
<td>sigma</td><br />
<td>3</td><br />
</tr><br />
<tr><br />
<td>-weight</td><br />
<td>Optional</td><br />
<td>weight</td><br />
<td>10</td><br />
</tr><br />
<tr><br />
<td>-size</td><br />
<td>Optional</td><br />
<td>Pixel Size[A]</td><br />
<td>5</td><br />
</tr><br />
<tr><br />
<td>-W</td><br />
<td>Optional</td><br />
<td>Image Width[A]</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-H</td><br />
<td>Optional</td><br />
<td>Image Height[A]</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-cx</td><br />
<td>Optional</td><br />
<td>x: Centre[A]</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-cy</td><br />
<td>Optional</td><br />
<td>y: Centre[A]</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-a</td><br />
<td>Optional</td><br />
<td>Angle: [degree]</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-m</td><br />
<td>Optional</td><br />
<td>Mode</td><br />
<td>2</td><br />
</tr><br />
<tr><br />
<td>-h</td><br />
<td>Optional</td><br />
<td>Help</td><br />
<td> </td><br />
</tr><br />
</div><br />
</table><br />
<br />
<div>mrcImageFileSize＝(sigma_range*sigmax*2) x (sigma_range*sigmay*2)</div><br />
<br />
=== -m details ===<br />
<table border="1"><br />
<div align="left"><br />
<tr><br />
<th>Value</th><br />
<th>Description</th><br />
</tr><br />
<tr><br />
<td>0</td><br />
<td>char (1 byte)</td><br />
</tr><br />
<tr><br />
<td>2</td><br />
<td>float (4 bytes)</td><br />
</tr><br />
</div><br />
</table><br />
<br />
<br />
== Execution example ==<br />
===------Example of options only essential------===<br />
<table><br />
<tr><br />
<td>[[File:Outdata-mrcImageGaussDisc.png]]<br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.743568<br><br />
1.77904<br><br />
0.136849<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -sigmax,-sigmay------===<br />
====Case: -sigmax=30,-sigmay=30====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax30y30-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.826111<br><br />
1.85693<br><br />
0.0501874<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
====Case: -sigmax=50,-sigmay=50====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax50y50-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.84426<br><br />
1.87314<br><br />
0.0307072<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -sigma_range------===<br />
====Case: -sigmax=30,-sigmay=30====<br />
=====Case: -sigma_range=3 (default)=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax30y30-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.826111<br><br />
1.85693<br><br />
0.0501874<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
=====Case: -sigma_range=5=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax30y30-sigma_range5-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.92875e-21<br><br />
10<br><br />
0.303943<br><br />
1.19471<br><br />
0.0195854<br></p><br />
</td><br />
</tr><br />
</table><br />
<div>The size of the disc isn't changed, but the size of the image is changed.</div><br />
<br />
===------Option -weight------===<br />
====Case: -sigmax=30,-sigmay=30====<br />
=====Case: -weight=10 (default)=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax30y30-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.826111<br><br />
1.85693<br><br />
0.0501874<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
=====Case: -weight=30=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-sigmax30y30-weight30-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">4.56899e-07<br><br />
30<br><br />
2.47833<br><br />
5.5708<br><br />
0.150562<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -size------===<br />
====Case: -size=1====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-size1-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.84426<br><br />
1.87314<br><br />
0.0307072<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -W,-H------===<br />
====Case: -W=100,-H=100====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-W100H100-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">2.52616e-19<br><br />
8.82497<br><br />
0.314159<br><br />
1.2133<br><br />
0.0606651<br></p><br />
</td><br />
</tr><br />
</table><br />
<div>The default of -size is 1. Therefore the width of x and y are 20.</div><br />
<br />
====Case: -W=100,-H=100 (with -size=1)====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-W100-H100-size1-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">5.21673e-21<br><br />
9.95012<br><br />
0.314159<br><br />
1.2133<br><br />
0.012133<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -cx,-cy------===<br />
<div>The default of -cx and -cy are 0. Therefore the disc is put at the center ,if -cx and -cy are not set.</div><br />
====Case: -cx=10,-cy=10 (with -size=1)====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-size1cx10cy10-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.26642e-13<br><br />
10<br><br />
0.841155<br><br />
1.87449<br><br />
0.0307294<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
====Case: -cx=-10,-cy=-10 (with -size=1)====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-size1cx-10cy-10-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.26642e-13<br><br />
10<br><br />
0.841155<br><br />
1.87449<br><br />
0.0307294<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
===------Option -m------===<br />
====Case: -size=1====<br />
=====Case: -m=0=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-size1m0-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">0<br><br />
10<br><br />
0.67025<br><br />
1.74607<br><br />
0.028624<br></p><br />
</td><br />
</tr><br />
</table><br />
<br />
=====Case: m=2=====<br />
<table><br />
<tr><br />
<td>[[File:Outdata-size1-mrcImageGaussDisc.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">1.523e-07<br><br />
10<br><br />
0.84426<br><br />
1.87314<br><br />
0.0307072<br></p><br />
</td><br />
</tr><br />
</table></div>
Kinoshita