mrcImageHelicalProjection - Revision history

Kinoshita: Created page with "'''mrcImageHelicalProjection''' is Eos's Command that obtains a projection image according to the helical symmetry. == List of option == === Main option ===
2014-07-25T01:58:53Z

Created page with "'''mrcImageHelicalProjection''' is Eos's Command that obtains a projection image according to the helical symmetry. == List of option == === Main option === <table..."

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'''mrcImageHelicalProjection''' is [[Eos]]'s [[Command]] that obtains a projection image according to the helical symmetry.

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[mrcImage]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-dz</td>
<td>Optional</td>
<td>deltaz(A)</td>
<td>27.3</td>
</tr>
<tr>
<td>-dp</td>
<td>Optional</td>
<td>deltaphi(degree)</td>
<td>13.84</td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td></td>
</tr>
</table>

== Execution example ==
===[[Media:Input-ThickFilaments1.mrc | Input file]] image===
<table>
<tr>
<td><p align="Center">[[File:Input-mrcImageHelicalProjection.png]]<br>
xy-plane<br></p>
</td>
<td><p align="Center">[[File:Input1-mrcImageHelicalProjection.png]]<br>
yz-plane<br></p>
</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">0 (0, 0, 0)<br>
4.07334 (34, 9, 75)<br>
0.00164516<br>
0.0572113<br>
8.29149e-05<br></p>
</td>
</tr>
</table>

=== Example of options only essential ===
<table>
<tr>
<td>[[File:Outdata-mrcImageHelicalProjection.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-1.34305 (14, 51, 0)<br>
7.48999 (27, 58, 0)<br>
0.164765<br>
0.865264<br>
0.0125401<br></p>
</td>
</tr>
</table>

=== Option -dz===
====Case: dz=45====
<table>
<tr>
<td>[[File:Outdata-dz-mrcImageHelicalProjection.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-8.29312 (13, 23, 0)<br>
116.467 (35, 59, 0)<br>
0.164594<br>
3.59473<br>
0.0520975<br></p>
</td>
</tr>
</table>

=== Option -dp===
====Case: dp=10====
<table>
<tr>
<td>[[File:Outdata-dp10-mrcImageHelicalProjection.png]]</td>
<td><p align="left">Min<br>
Max<br>
Mean<br>
SD<br>
SE<br></p>
</td>
<td><p align="left">-2.62539 (47, 14, 0)<br>
19.7339 (9, 32, 0)<br>
0.164407<br>
1.49472<br>
0.0216626<br></p>
</td>
</tr>
</table>