mrcImageOrientationSearchByHybridization - Revision history

Kinoshita: Created page with "'''mrcImageOrientationSearchByHybridization''' is Eos's Command. == List of option == === Main option ===

Option ..."
2014-07-29T00:54:27Z

Created page with "'''mrcImageOrientationSearchByHybridization''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>..."

New page
'''mrcImageOrientationSearchByHybridization''' is [[Eos]]'s [[Command]].

== List of option ==
=== Main option ===
<table border="1">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-I</td>
<td>Essential</td>
<td>Input: [[ASCII]](File List)</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output(Header)</td>
<td>NULL</td>
</tr>
<tr>
<td>-e</td>
<td>Essential</td>
<td>Output(Extension)</td>
<td>NULL</td>
</tr>
<tr>
<td>-ir</td>
<td>Optional</td>
<td>IncreaseRate</td>
<td>1</td>
</tr>
<tr>
<td>-hpn</td>
<td>Optional</td>
<td>HybridizationPointNumber(The number of hybridization points)</td>
<td>1</td>
</tr>
<tr>
<td>-ms</td>
<td>Optional</td>
<td>ModeOfSelection</td>
<td>0</td>
</tr>
<tr>
<td>-ird</td>
<td>Optional</td>
<td>InitialRandomData</td>
<td>0</td>
</tr>
<tr>
<td>-c</td>
<td>Optional</td>
<td>ConfigurationFile</td>
<td>NULL</td>
</tr>
<tr>
<td>-m</td>
<td>Optional</td>
<td>Mode</td>
<td>0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</table>
<br>

=== -m details ===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td>create children angle file</td>
</tr>
<tr>
<td>1</td>
<td>do not create children angle file , create match angle file</td>
</tr>
</table>
<br>

===-ir details===

<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>1</td>
<td>Increase number is 45 (filenum = 10)</td>
</tr>
<tr>
<td>2</td>
<td>Increase number is 90 (filenum = 10)</td>
</tr>
</table>
<br>

===-ms details===
<table border="1">
<tr>
<th>Value</th>
<th>Description</th>
</tr>
<tr>
<td>0</td>
<td>random</td>
</tr>
<tr>
<td>1</td>
<td>myself (-ird)</td>
</tr>
</table>
<br>

===-I format===
<pre>
childrenfile0
childrenfile1
.
.
.

</pre>

<div>childrenfile format</div>
<pre>
filename RotMode phi theta psi
. . . . .
. . . . .
. . . . .

</pre>
<br>

== Execution example ==
===Input file's data===
<pre>
/Eos/Input-file0.txt
/Eos/Input-file1.txt

</pre>
<br>

<div>Input-file0.txt's data</div>
<pre>
/Eos/img/Input0 ZONS 0 0 0
/Eos/img/Input1 ZONS 0 45 0
/Eos/img/Input2 ZONS 0 0 45

</pre>
<br>

<div>Input-file1.txt's data</div>
<pre>
/Eos/img/Input3 ZONS 90 0 0
/Eos/img/Input4 ZONS 90 30 0
/Eos/img/Input5 ZONS 90 60 0

</pre>
<br>

=== Example of options only essential ===
<div>Output</div>
<pre>
1.000000 0.000000 0.000000
0.000000 1.000000 0.000000
0.000000 0.000000 1.000000
0.000000 0.000000 0.000000
0.707107 0.000000 0.707107
0.000000 1.000000 0.000000
-0.707107 0.000000 0.707107
0.000000 0.000000 0.000000
0.707107 -0.707107 0.000000
0.707107 0.707107 0.000000
0.000000 0.000000 1.000000
0.000000 0.000000 0.000000
1.000000 0.000000 0.000000
0.000000 1.000000 0.000000
0.000000 0.000000 1.000000
0.000000 0.000000 0.000000
1.000000 -0.000000 -0.000000
-0.000000 0.866025 -0.500000
0.000000 0.500000 0.866025
0.000000 0.000000 0.000000
1.000000 -0.000000 -0.000000
-0.000000 0.500000 -0.866025
0.000000 0.866025 0.500000
0.000000 0.000000 0.000000
HybridizationPoint = 1 FileNum = 1
</pre>
<br>

<div>In case of o=/Eos/Outdata, e=txt, it outputs by filename as the following.</div>
<pre>
/Eos/Outdata-0.txt
/Eos/Outdata-1.txt
/Eos/Outdata-2.txt
</pre>
<br>

<div>Outdata-0.txt's data</div>
<pre>
/Eos/img/Input3 ZONS 0.0 0.0 0.0
/Eos/img/Input1 ZONS 0.0 45.0 0.0
/Eos/img/Input2 ZONS 45.0 0.0 0.0
</pre>
<br>

<div>Outdata-1.txt's data</div>
<pre>
/Eos/img/Input0 ZONS 0.0 0.0 0.0
/Eos/img/Input1 ZONS 0.0 45.0 0.0
/Eos/img/Input2 ZONS 45.0 0.0 0.0
</pre>
<br>

<div>Outdata-2.txt's data</div>
<pre>
/Eos/img/Input3 ZONS 0.0 0.0 0.0
/Eos/img/Input4 ZONS 90.0 30.0 270.0
/Eos/img/Input5 ZONS 90.0 60.0 270.0
</pre>
<br>

<br>