http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?action=history&feed=atom&title=mrcImageResolutionEstimateForFilaments
mrcImageResolutionEstimateForFilaments - Revision history
2026-05-14T07:07:59Z
Revision history for this page on the wiki
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http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageResolutionEstimateForFilaments&diff=2188&oldid=prev
Kinoshita: /* Execution example */
2014-07-30T04:31:18Z
<p><span dir="auto"><span class="autocomment">Execution example</span></span></p>
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<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 04:31, 30 July 2014</td>
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<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -d------===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -d------===</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>====-d=0.1====</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>====<ins class="diffchange diffchange-inline">Case: </ins>-d=0.1====</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata-d0.1-mrcImageResolutionEstimateForFilaments.png]]</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata-d0.1-mrcImageResolutionEstimateForFilaments.png]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -H------===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -H------===</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>====-H=0.1====</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>====<ins class="diffchange diffchange-inline">Case: </ins>-H=0.1====</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata.-H0.1-mrcImageResolutionEstimateForFilaments.png]]</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata.-H0.1-mrcImageResolutionEstimateForFilaments.png]]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -m------===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>===------Option -m------===</div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>====<del class="diffchange diffchange-inline">Mode</del>:<del class="diffchange diffchange-inline">１</del>====</div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>====<ins class="diffchange diffchange-inline">Case</ins>: <ins class="diffchange diffchange-inline">m=1</ins>====</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata-m1-mrcImageResolutionEstimateForFilaments.png]]</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> [[File:Outdata-m1-mrcImageResolutionEstimateForFilaments.png]]</div></td></tr>
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Kinoshita
http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageResolutionEstimateForFilaments&diff=2179&oldid=prev
Kinoshita: Created page with "'''mrcImageResolutionEstimateForFilaments''' is Eos's Command. == List of option == === Main option === <table border="1"> <div align="left"> <tr> <th>Opt..."
2014-07-30T04:27:31Z
<p>Created page with "'''mrcImageResolutionEstimateForFilaments''' is <a href="/Eos/index.php/Eos" title="Eos">Eos</a>'s <a href="/Eos/index.php/Command" title="Command">Command</a>. == List of option == === Main option === <table border="1"> <div align="left"> <tr> <th>Opt..."</p>
<p><b>New page</b></p><div>'''mrcImageResolutionEstimateForFilaments''' is [[Eos]]'s [[Command]].<br />
<br />
== List of option ==<br />
=== Main option ===<br />
<table border="1"><br />
<div align="left"><br />
<tr><br />
<th>Option</th><br />
<th>Essential/Optional</th><br />
<th>Description</th><br />
<th>Default</th><br />
</tr><br />
<tr><br />
<td>-i1</td><br />
<td>Optional</td><br />
<td>Input1: [[mrcImage]](3D)</td><br />
<td>NULL</td><br />
</tr><br />
<tr><br />
<td>-i2</td><br />
<td>Optional</td><br />
<td>Input2: [[mrcImage]](3D)</td><br />
<td>NULL</td><br />
</tr><br />
<tr><br />
<td>-d</td><br />
<td>Optional</td><br />
<td>Interval of output data(1/A).</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-H</td><br />
<td>Optional</td><br />
<td>High threshold.</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-m</td><br />
<td>Optional</td><br />
<td>Mode</td><br />
<td>0</td><br />
</tr><br />
<tr><br />
<td>-h</td><br />
<td>Optional</td><br />
<td>Help</td><br />
<td> </td><br />
</tr><br />
</div><br />
</table><br />
<br />
=== -m details ===<br />
<table border="1"><br />
<div align="left"><br />
<tr><br />
<th>Value</th><br />
<th>Description</th><br />
</tr><br />
<tr><br />
<td>0</td><br />
<td>Fourier shell correlation</td><br />
</tr><br />
<tr><br />
<td>1</td><br />
<td>Fourier shell phase residual</td><br />
</tr><br />
</div><br />
</table><br />
<br />
<br />
== Execution example ==<br />
===------Input file1's image (section at z-axis)------===<br />
<table><br />
<tr><br />
<td>[[File:121p-noise0.1section-mrcImageResolutionEstimateForFilaments.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">-0.52019<br><br />
2.26217<br><br />
0.00147712<br><br />
0.109091<br><br />
0.000106952<br></p><br />
</td><br />
</tr><br />
</table><br />
[[File:121p-noise0.1section-info-mrcImageResolutionEstimateForFilaments.png]]<br />
<br />
<br><br />
<br><br />
===------Input file2's image (section at z-axis)------===<br />
<table><br />
<tr><br />
<td>[[File:121p-noise0.5section-mrcImageResolutionEstimateForFilaments.png]]</td><br />
<td><p align="left">Min<br><br />
Max<br><br />
Mean<br><br />
SD<br><br />
SE<br></p><br />
</td><br />
<td><p align="left">-2.5782<br><br />
3.1285<br><br />
0.000781539<br><br />
0.501657<br><br />
0.000491821<br></p><br />
</td><br />
</tr><br />
</table><br />
[[File:121p-noise0.5.section-info-mrcImageResolutionEstimateForFilaments.png]]<br />
<br />
===------Example of options only essential------===<br />
[[File:Outdata-mrcImageResolutionEstimateForFilaments.png]]<br />
<br />
===------Option -d------===<br />
====-d=0.1====<br />
[[File:Outdata-d0.1-mrcImageResolutionEstimateForFilaments.png]]<br />
<br />
===------Option -H------===<br />
====-H=0.1====<br />
[[File:Outdata.-H0.1-mrcImageResolutionEstimateForFilaments.png]]<br />
<br />
===------Option -m------===<br />
====Mode:１====<br />
[[File:Outdata-m1-mrcImageResolutionEstimateForFilaments.png]]</div>
Kinoshita