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mrcImagestoRef - Revision history
2026-05-04T16:25:47Z
Revision history for this page on the wiki
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Kinoshita: Created page with "'''mrcImagestoRef''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optional</th>..."
2014-08-25T04:50:17Z
<p>Created page with "'''mrcImagestoRef''' is <a href="/Eos/index.php/Eos" title="Eos">Eos</a>'s <a href="/Eos/index.php/Command" title="Command">Command</a>. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optional</th>..."</p>
<p><b>New page</b></p><div>'''mrcImagestoRef''' is [[Eos]]'s [[Command]].<br />
<br />
<br />
== List of option ==<br />
=== Main option ===<br />
<table border="1"><br />
<tr> <br />
<th>Option</th> <br />
<th>Essential/Optional</th> <br />
<th>Description</th> <br />
<th>Default</th> <br />
</tr> <br />
<tr> <br />
<td>-I</td> <br />
<td>Optional</td> <br />
<td>Input: [[ASCII]](FileList)</td> <br />
<td>stdin</td> <br />
</tr> <br />
<tr> <br />
<td>-o</td> <br />
<td>Essential</td> <br />
<td>Output: [[mrcImage]]</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-c</td> <br />
<td>Optional</td> <br />
<td>ConfigurationFile</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-m</td> <br />
<td>Optional</td> <br />
<td>Mode</td> <br />
<td>0</td> <br />
</tr> <br />
<tr> <br />
<td>-h</td> <br />
<td>Optional</td> <br />
<td>Help</td> <br />
<td> </td> <br />
</tr> <br />
</table> <br />
<br />
=== -m details ===<br />
<table border="1"><br />
<tr> <br />
<th>Value</th> <br />
<th>Description</th> <br />
</tr> <br />
<tr> <br />
<td>0</td> <br />
<td></td> <br />
</tr> <br />
</table> <br />
<br />
===Input file format===<br />
<pre><br />
mrcfile1<br />
mrcfile2<br />
.<br />
.<br />
.<br />
</pre><br />
<br />
<br />
== Execution example ==<br />
===Input file's data===<br />
<pre><br />
/Eos/img/Input0.mrc<br />
/Eos/img/Input1.mrc<br />
/Eos/img/Input2.mrc<br />
/Eos/img/Input3.mrc<br />
/Eos/img/Input4.mrc<br />
/Eos/img/Input5.mrc<br />
/Eos/img/Input6.mrc<br />
/Eos/img/Input7.mrc<br />
/Eos/img/Input8.mrc<br />
/Eos/img/Input9.mrc<br />
/Eos/img/Input10.mrc<br />
/Eos/img/Input11.mrc<br />
/Eos/img/Input12.mrc<br />
<br />
</pre><br />
<br />
<div>Input0's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input0-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (33, 26, 0)<br> <br />
0.071102<br> <br />
0.343722<br> <br />
0.00491031<br><br />
348.4<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input1's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input1-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (33, 16, 0)<br> <br />
0.240082<br> <br />
0.528681<br> <br />
0.00755259<br><br />
1176.4<br></p> <br />
</td> <br />
</tr> <br />
</table><br />
<br />
<div>Input2's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input2-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (31, 11, 0)<br> <br />
0.383714<br> <br />
0.613152<br> <br />
0.00875931<br><br />
1880.2<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input3's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input3-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (34, 7, 0)<br> <br />
0.487714<br> <br />
0.642918<br> <br />
0.00918454<br><br />
2389.8<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input4's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input4-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (32, 5, 0)<br> <br />
0.554204<br> <br />
0.646353<br> <br />
0.00923361<br><br />
2715.6<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input5's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input5-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (31, 4, 0)<br> <br />
0.607388<br> <br />
0.652908<br> <br />
0.00932725<br><br />
2976.2<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input6's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input6-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (33, 3, 0)<br> <br />
0.640245<br> <br />
0.661363<br> <br />
0.00944804<br><br />
3137.2<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input7's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input7-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (30, 4, 0)<br> <br />
0.621714<br> <br />
0.657716<br> <br />
0.00939594<br><br />
3046.4<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input8's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input8-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (30, 5, 0)<br> <br />
0.580327<br> <br />
0.650856<br> <br />
0.00929794<br><br />
2843.6<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input9's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input9-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (30, 7, 0)<br> <br />
0.508163<br> <br />
0.640579<br> <br />
0.00915113<br><br />
2490<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input10's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input10-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (31, 10, 0)<br> <br />
0.413959<br> <br />
0.618782<br> <br />
0.00883974<br><br />
2028.4<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input11's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input11-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (34, 14, 0)<br> <br />
0.280653<br> <br />
0.552908<br> <br />
0.00789869<br><br />
1375.2<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<div>Input12's image</div><br />
<table> <br />
<tr> <br />
<td>[[File:Input12-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (33, 22, 0)<br> <br />
0.120408<br> <br />
0.410515<br> <br />
0.0058645<br><br />
590<br></p> <br />
</td> <br />
</tr> <br />
</table><br />
<br />
<br />
=== Case: Options only essential ===<br />
<table> <br />
<tr> <br />
<td>[[File:Outdata-mrcImagestoRef.png]]</td> <br />
<td><p align="left">Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br><br />
Sum<br></p> <br />
</td> <br />
<td><p align="left">0 (0, 0, 0)<br> <br />
2 (33, 26, 1)<br> <br />
0.393548<br> <br />
0.609665<br> <br />
0.00232771<br> <br />
26997.4<br></p> <br />
</td> <br />
</tr> <br />
</table></div>
Kinoshita