http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?action=history&feed=atom&title=mrcRefImagepwzCorrelation
mrcRefImagepwzCorrelation - Revision history
2026-05-14T09:41:35Z
Revision history for this page on the wiki
MediaWiki 1.23.6
http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcRefImagepwzCorrelation&diff=2891&oldid=prev
Kinoshita: /* Main option */
2014-08-06T03:01:37Z
<p><span dir="auto"><span class="autocomment">Main option</span></span></p>
<table class='diff diff-contentalign-left'>
<col class='diff-marker' />
<col class='diff-content' />
<col class='diff-marker' />
<col class='diff-content' />
<tr style='vertical-align: top;'>
<td colspan='2' style="background-color: white; color:black; text-align: center;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black; text-align: center;">Revision as of 03:01, 6 August 2014</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 44:</td>
<td colspan="2" class="diff-lineno">Line 44:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>-m</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>-m</td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Optional</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Optional</td>  </div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> <td><del class="diffchange diffchange-inline">Mode1を設定</del></td>  </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> <td><ins class="diffchange diffchange-inline">Mode1</ins></td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>0</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>0</td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td></tr>
<tr><td colspan="2" class="diff-lineno">Line 50:</td>
<td colspan="2" class="diff-lineno">Line 50:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>-M</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>-M</td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Optional</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>Optional</td>  </div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> <td><del class="diffchange diffchange-inline">Mode2を設定</del></td>  </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> <td><ins class="diffchange diffchange-inline">Mode2</ins></td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>0</td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td>0</td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td></tr>
<tr><td colspan="2" class="diff-lineno">Line 59:</td>
<td colspan="2" class="diff-lineno">Line 59:</td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td> </td>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> <td> </td>  </div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div> </tr>  </div></td></tr>
<tr><td class='diff-marker'>−</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </table>  </div></td><td class='diff-marker'>+</td><td style="color:black; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> </table></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=== -m details ===</div></td><td class='diff-marker'> </td><td style="background-color: #f9f9f9; color: #333333; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #e6e6e6; vertical-align: top; white-space: pre-wrap;"><div>=== -m details ===</div></td></tr>
</table>
Kinoshita
http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcRefImagepwzCorrelation&diff=2890&oldid=prev
Kinoshita: Created page with "'''mrcRefImagepwzCorrelation''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optio..."
2014-08-06T03:01:21Z
<p>Created page with "'''mrcRefImagepwzCorrelation''' is <a href="/Eos/index.php/Eos" title="Eos">Eos</a>'s <a href="/Eos/index.php/Command" title="Command">Command</a>. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optio..."</p>
<p><b>New page</b></p><div>'''mrcRefImagepwzCorrelation''' is [[Eos]]'s [[Command]].<br />
<br />
<br />
== List of option ==<br />
=== Main option ===<br />
<table border="1"><br />
<tr> <br />
<th>Option</th> <br />
<th>Essential/Optional</th> <br />
<th>Description</th> <br />
<th>Default</th> <br />
</tr> <br />
<tr> <br />
<td>-i</td> <br />
<td>Essential</td> <br />
<td>Input: [[mrcImage]]</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-o</td> <br />
<td>Essential</td> <br />
<td>Output: [[mrcImage]]</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-r</td> <br />
<td>Optional</td> <br />
<td>Reference: [[mrcImage]]</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-dy</td> <br />
<td>Optional</td> <br />
<td>Delta y</td> <br />
<td>1</td> <br />
</tr> <br />
<tr> <br />
<td>-c</td> <br />
<td>Optional</td> <br />
<td>ConfigurationFile</td> <br />
<td>NULL</td> <br />
</tr> <br />
<tr> <br />
<td>-m</td> <br />
<td>Optional</td> <br />
<td>Mode1を設定</td> <br />
<td>0</td> <br />
</tr> <br />
<tr> <br />
<td>-M</td> <br />
<td>Optional</td> <br />
<td>Mode2を設定</td> <br />
<td>0</td> <br />
</tr> <br />
<tr> <br />
<td>-h</td> <br />
<td>Optional</td> <br />
<td>Help</td> <br />
<td> </td> <br />
</tr> <br />
</table> <br />
<br />
=== -m details ===<br />
<table border="1"><br />
<tr> <br />
<th>Value</th> <br />
<th>Description</th> <br />
</tr> <br />
<tr> <br />
<td>0</td> <br />
<td></td> <br />
</tr> <br />
</table> <br />
<br />
<br />
== Execution example ==<br />
===[[Media:Input-ThickFilaments1-R-N.mrc | Input file]] image===<br />
<table> <br />
<tr> <br />
<td><p align="center">[[File:Input-ThickFilaments1-R-N.png]]<br> <br />
z=46 ~ 60<br></p> <br />
</td> <br />
<td><p align="left">Size<br> <br />
Mode<br> <br />
Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br></p> <br />
</td> <br />
<td><p align="left">( 90, 70, 106)<br> <br />
mrcFloatImage <br> <br />
-2.59583 (63, 51, 40)<br> <br />
15 (8, 0, 0)<br> <br />
0.119059<br> <br />
0.820038<br> <br />
0.00100348<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<br />
===[[Media:Input-ThickFilaments1-R.mrc | Reference file]] image===<br />
<table> <br />
<tr> <br />
<td><p align="center">[[File:Input-ThickFilaments1-R.png]]<br> <br />
z=46 ~ 60<br></p> <br />
</td> <br />
<td><p align="left">Size<br> <br />
Mode<br> <br />
Min<br> <br />
Max<br> <br />
Mean<br> <br />
SD<br> <br />
SE<br></p> <br />
</td> <br />
<td><p align="left">( 90, 70, 106)<br> <br />
mrcFloatImage <br> <br />
-1.28686 (30, 27, 1)<br> <br />
15 (8, 0, 0)<br> <br />
0.118695<br> <br />
0.579571<br> <br />
0.000709225<br></p> <br />
</td> <br />
</tr> <br />
</table> <br />
<br />
<br />
=== Example of options only essential ===<br />
<div>z=1 's data By [[mrcImageMakeDump]]</div><br />
<pre><br />
0 0 -0.261288 <br />
1 0 -0.263307 <br />
2 0 -0.263327 <br />
3 0 -0.262572 <br />
4 0 -0.263615 <br />
5 0 -0.262319 <br />
6 0 -0.262019 <br />
7 0 -0.261041 <br />
8 0 -0.262616 <br />
9 0 -0.263653 <br />
<br />
...<br />
<br />
25 0 -0.263014 <br />
26 0 -0.261338 <br />
27 0 -0.259267 <br />
28 0 -0.260333 <br />
29 0 -0.263379 <br />
30 0 -0.265072 <br />
31 0 -0.263059 <br />
32 0 -0.26286 <br />
33 0 -0.261021 <br />
34 0 -0.259493 <br />
<br />
...<br />
<br />
95 0 -0.260996 <br />
96 0 -0.259443 <br />
97 0 -0.258205 <br />
98 0 -0.258769 <br />
99 0 -0.260744 <br />
100 0 -0.261576 <br />
101 0 -0.263029 <br />
102 0 -0.261167 <br />
103 0 -0.259021 <br />
104 0 -0.25917 <br />
</pre><br />
<br />
<br />
=== Option -M===<br />
====Case: M=1==== <br />
<div>z=1 's data By [[mrcImageMakeDump]]</div><br />
<pre><br />
0 0 -0.00560845 <br />
1 0 -0.00563985 <br />
2 0 -0.00565499 <br />
3 0 -0.00565665 <br />
4 0 -0.00565135 <br />
5 0 -0.0056151 <br />
6 0 -0.00561818 <br />
7 0 -0.00567358 <br />
8 0 -0.00570779 <br />
9 0 -0.00572629 <br />
<br />
...<br />
<br />
47 0 -0.00560999 <br />
48 0 -0.00561556 <br />
49 0 -0.00565666 <br />
50 0 -0.00565574 <br />
51 0 -0.00568484 <br />
52 0 -0.00580522 <br />
53 0 -0.00566566 <br />
54 0 -0.0056534 <br />
55 0 -0.00566492 <br />
56 0 -0.00566565 <br />
<br />
...<br />
<br />
95 0 -0.00565801 <br />
96 0 -0.005636 <br />
97 0 -0.00562967 <br />
98 0 -0.00561529 <br />
99 0 -0.00562182 <br />
100 0 -0.00564172 <br />
101 0 -0.00564147 <br />
102 0 -0.00563662 <br />
103 0 -0.00557032 <br />
104 0 -0.00561011 <br />
</pre></div>
Kinoshita