Kinoshita: /* ------Input file's image------ */

2014-08-18T00:10:21Z

‎------Input file's image------

2014-08-18T00:09:37Z

‎------Input file's image------

Kinoshita: Created page with "'''pdbRotation''' is Eos's Command that rotates PDB file. == List of option == === Main option ===

Option
2014-08-18T00:06:31Z

Created page with "'''pdbRotation''' is Eos's Command that rotates PDB file. == List of option == === Main option === <table border="1"> <div align="left"> <tr> <th>Option</..."

New page
'''pdbRotation''' is [[Eos]]'s [[Command]] that rotates [[PDB]] file.

== List of option ==
=== Main option ===
<table border="1">
<div align="left">
<tr>
<th>Option</th>
<th>Essential/Optional</th>
<th>Description</th>
<th>Default</th>
</tr>
<tr>
<td>-i</td>
<td>Essential</td>
<td>Input: [[PDB]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-o</td>
<td>Essential</td>
<td>Output: [[PDB]]</td>
<td>NULL</td>
</tr>
<tr>
<td>-ZXY</td>
<td>Optional</td>
<td>Rotation Order: Z-axis→X-axis→Y-axis</td>
<td>0.0　0.0　0.0</td>
</tr>
<tr>
<td>-ZYX</td>
<td>Optional</td>
<td>Rotation Order: Z-axis→Y-axis→X-axis</td>
<td>0.0　0.0　0.0</td>
</tr>
<tr>
<td>-YXZ</td>
<td>Optional</td>
<td>Rotation Order: Y-axis→X-axis→Z-axis</td>
<td>0.0　0.0　0.0</td>
</tr>
<tr>
<td>-XYZ</td>
<td>Optional</td>
<td>Rotation Order: X-axis→Y-axis→Z-axis</td>
<td>0.0　0.0　0.0</td>
</tr>
<tr>
<td>-EA</td>
<td>Optional</td>
<td>[[Euler Angle]]</td>
<td>RotMode　0.0　0.0　0.0</td>
</tr>
<tr>
<td>-h</td>
<td>Optional</td>
<td>Help</td>
<td>　</td>
</tr>
</div>
</table>

=== [[Euler Angle|Rotation Order]] details ===
<pre>
1st digit: Setting the rotation axis of the first
2nd digit: Setting the order-1 of the rotation axis
O: Order Z -> Y-> X
E: Order Z -> X-> Y
3rd digit: Setting the order-2 of the rotation axis
Y: Keep the order
N: Reverse the order
4th digit: Setting rotation method
S: Rotate the object
N: Move the coordinates
</pre>
<br>

== Execution example ==
===------[[:Media:Input-121P.pdb.zip|Input file]]'s image------===
<div>[[File:121p-pdbRotation.png]]<br>
Input file's details by [[pdbInfo]]<br>
<br>
[[File:121p-Info-pdbRotation.png]]<br>
There isn't difference between input and output by default.</div>
<br>

===------Option -ZXY------===
<table>
<tr>
<td>Case: z-axis、x-axis、y-axis are 10<br></td>
<td>　Case: z-axis、x-axis、y-axis are 100<br></td></tr>
<tr><td>[[File:121p.10zxy-pdbRotation.png]]<br></td>
<td>[[File:121p.100zxy-pdbRotation.png]]<br></td></tr>
</table>
<br>

===------Option -ZYX------===
<table>
<tr>
<td>Case: z-axis、y-axis、x-axis are 10<br></td>
<td>　Case: z-axis、y-axis、x-axis are 100<br></td></tr>
<tr><td>[[File:121p.10zyx-pdbRotation.png]]<br></td>
<td>[[File:121p.100zyx-pdbRotation.png]]<br></td></tr>
</table>
<br>

===------Option -YXZ------===
<table>
<tr>
<td>Case: y-axis、x-axis、z-axis are 10<br></td>
<td>　Case: y-axis、x-axis、z-axis are 100<br></td></tr>
<tr><td>[[File:121p.10yxz-pdbRotation.png]]<br></td>
<td>[[File:121p.100yxz-pdbRotation.png]]<br></td></tr>
</table>
<br>

===------Option -XYZ------===
<table>
<tr>
<td>Case: x-axis、y-axis、z-axis are 10<br></td>
<td>　Case: x-axis、y-axis、z-axis are 100<br></td></tr>
<tr><td>[[File:121p.10xyz-pdbRotation.png]]<br></td>
<td>[[File:121p.100xyz-pdbRotation.png]]<br></td></tr>
</table>
<br>

===------Compare images of each option------===
<table>
<tr>
<td>Case: Setting 10 to all axis data<br></td>
<td>　Case: Setting 100 to all axis data<br></td></tr>
<tr><td>[[File:10goukei-pdbRotation.png]]<br>
White…Input file<br>
Pink…Option　-ZXY<br>
Blue…Option　-ZYX<br>
Yellow…Option　-YXZ<br>
Red…Option　-XYZ<br></td>
<td>[[File:100goukei-pdbRotation.png]]<br></td>
<td></td></tr>
</table>
<br>

===------Option -EA------===
==== Option -EA XENS 30 30 30 ====
[[File:121p.ea-pdbRotation.png]]<br>
<div>White…Input image、Pink…Output image</div>
<br>

@@ Line 83: / Line 83: @@
 	Input file's details by [[pdbInfo]]<br>
 <br>
-	[[File:121p-Info-pdbRotation.png]]<br>
+	[[File:121p-Info.png]]<br>
 	*There isn't difference between input and output by default.</div>
 <br>

@@ Line 80: / Line 80: @@
 == Execution example ==
 ===------[[:Media:Input-121P.pdb.zip|Input file]]'s image------===
-	<div>[[File:121p-pdbRotation.png]]<br>
+	<div>[[File:121p.png]]<br>
 	Input file's details by [[pdbInfo]]<br>
 <br>
@@ Line 86: / Line 86: @@
 	*There isn't difference between input and output by default.</div>
 <br>
-−
 ===------Option -ZXY------===
 	<table>