Difference between revisions of "PDB"
From EosPedia
(Created page with "'''PDB''' is a data file that is shown the structure of protein. Because it is written in ASCII, you can see details by using editor. EosでInput fileとして使用...") |
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| − | '''PDB''' is a data file that is shown the structure of protein. Because it is written in [[ASCII]], you can see details by using editor. [[Eos]] | + | '''PDB''' is a data file that is shown the structure of protein. Because it is written in [[ASCII]], you can see details by using editor. When it is used as Input file on [[Eos]], it is read the atom information by fixed word numbers. Therefore, If you write it by editor, follow this format. Otherwise, it may not work correctly. |
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Latest revision as of 02:33, 7 August 2014
PDB is a data file that is shown the structure of protein. Because it is written in ASCII, you can see details by using editor. When it is used as Input file on Eos, it is read the atom information by fixed word numbers. Therefore, If you write it by editor, follow this format. Otherwise, it may not work correctly.
Example of data
ATOM 1 N MET A 1 -7.176 27.779 18.367 1.00 14.06 0 N HETATM 1325 PG GCP A 167 5.150 7.172 38.327 1.00 11.69 0 P
