Difference between revisions of "mrcImageSiemensStar"

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(→‎Execution example)
(→‎Execution example)
 
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<br>
 
<br>
  
−
=== Option -Shape===
+
=== Option -m===
−
====Case: Shape=1====  
+
====Case: m=2====  
 
<table>  
 
<table>  
 
<tr>  
 
<tr>  
−
<td>[[File:Outdata-Shape1-mrcImageSiemensStar.png]]</td>  
+
<td>[[File:Outdata-m2-mrcImageSiemensStar.png]]</td>  
 
<td><p align="left">Min<br>  
 
<td><p align="left">Min<br>  
 
Max<br>  
 
Max<br>  
 
Mean<br>  
 
Mean<br>  
 
SD<br>  
 
SD<br>  
−
SE<br></p>  
+
SE<br>
 +
HeaderMode<br></p>  
 
</td>  
 
</td>  
−
<td><p align="left"><br>  
+
<td><p align="left">0<br>  
−
<br>  
+
1<br>  
−
<br>  
+
0.0983582<br>  
−
<br>  
+
0.297798<br>  
−
<br></p>  
+
0.00116327<br>
 +
2  (mrcFloatImage) <br></p>  
 
</td>  
 
</td>  
 
</tr>  
 
</tr>  
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<br>
 
<br>
  
−
====Case: Shape=2====  
+
=== Option -Shape===
 +
====Case: Shape=1, m=2====  
 
<table>  
 
<table>  
 
<tr>  
 
<tr>  
−
<td>[[File:Outdata-Shape2-mrcImageSiemensStar.png]]</td>  
+
<td>[[File:Outdata-Shape1-mrcImageSiemensStar.png]]</td>  
 
<td><p align="left">Min<br>  
 
<td><p align="left">Min<br>  
 
Max<br>  
 
Max<br>  
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SE<br></p>  
 
SE<br></p>  
 
</td>  
 
</td>  
−
<td><p align="left"><br>  
+
<td><p align="left">-1 (91, 84, 0)<br>  
−
<br>  
+
1 (84, 91, 0)<br>  
−
<br>  
+
-1.73472e-18<br>  
−
<br>  
+
0.313273<br>  
−
<br></p>  
+
0.00122372<br></p>  
 
</td>  
 
</td>  
 
</tr>  
 
</tr>  
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<br>
 
<br>
  
−
====Case: Shape=3====  
+
====Case: Shape=2====  
 
<table>  
 
<table>  
 
<tr>  
 
<tr>  
−
<td>[[File:Outdata-Shape3-mrcImageSiemensStar.png]]</td>  
+
<td>[[File:Outdata-Shape2-mrcImageSiemensStar.png]]</td>  
 
<td><p align="left">Min<br>  
 
<td><p align="left">Min<br>  
 
Max<br>  
 
Max<br>  
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SE<br></p>  
 
SE<br></p>  
 
</td>  
 
</td>  
−
<td><p align="left"><br>  
+
<td><p align="left">0 (0, 0, 0)<br>  
−
<br>  
+
1 (64, 64, 0)<br>  
−
<br>  
+
0.125<br>  
−
<br>  
+
0.330719<br>  
−
<br></p>  
+
0.00129187<br></p>  
 
</td>  
 
</td>  
 
</tr>  
 
</tr>  
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<br>
 
<br>
  
−
=== Option -m===
+
====Case: Shape=3, m=2====  
−
====Case: m=2====  
+
 
<table>  
 
<table>  
 
<tr>  
 
<tr>  
−
<td>[[File:Outdata-m2-mrcImageSiemensStar.png]]</td>  
+
<td>[[File:Outdata-Shape3-mrcImageSiemensStar.png]]</td>  
 
<td><p align="left">Min<br>  
 
<td><p align="left">Min<br>  
 
Max<br>  
 
Max<br>  
 
Mean<br>  
 
Mean<br>  
 
SD<br>  
 
SD<br>  
−
SE<br>
+
SE<br></p>  
−
HeaderMode<br></p>  
+
 
</td>  
 
</td>  
−
<td><p align="left">0<br>
+
<td><p align="left">-0.99729 (163, 123, 0)<br>  
−
1<br>  
+
0.999895 (163, 163, 0)<br>  
−
0.0983582<br>  
+
8.62013e-05<br>  
−
0.297798<br>  
+
0.264724<br>  
−
0.00116327<br>  
+
0.00103408<br></p>  
−
2  (mrcFloatImage) <br></p>  
+
 
</td>  
 
</td>  
 
</tr>  
 
</tr>  
 
</table>
 
</table>
 
<br>
 
<br>

Latest revision as of 02:10, 12 September 2014

mrcImageSiemensStar is Eos's Command that creates Siemens Star (for check of resolution).


List of option

Main option

Option Essential/Optional Description Default
-o Essential Output: mrcImage NULL
-N Optional Number: [pixel]: (Nx, Ny) (256, 256)
-R Optional Radius: [pixel] 64
-n Optional Number of Radial 18
-delta Optional Delta[A] 1.72
-c Optional ConfigurationFile NULL
-Shape Optional ShapeMode of Output 0
-m Optional HeaderMode of Output 0
-h Optional Help 　


-Shape details

Value Description
0 SiemensStar(Step)
1 SiemensStar(Cos)
2 Linear(Step)
3 Linear(Cos)


-m details

Value Description
0 char
2 float


Execution example

Example of options only essential

Outdata-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

0

1
0.0983582
0.297798

0.00116327


Option -N

Case: N=(128, 128)

Outdata-N128-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

0

1
0.393433
0.488511

0.0038165


Option -R

Case: R=128

Outdata-R128-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

0

1
0.39267
0.488344

0.0019076


Option -n

Case: n=9

Outdata-n9-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

0

1
0.0983582
0.297798

0.00116327


Option -m

Case: m=2

Outdata-m2-mrcImageSiemensStar.png

Min

Max
Mean
SD
SE

HeaderMode

0

1
0.0983582
0.297798
0.00116327

2 (mrcFloatImage)


Option -Shape

Case: Shape=1, m=2

Outdata-Shape1-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

-1 (91, 84, 0)

1 (84, 91, 0)
-1.73472e-18
0.313273

0.00122372


Case: Shape=2

Outdata-Shape2-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

0 (0, 0, 0)

1 (64, 64, 0)
0.125
0.330719

0.00129187


Case: Shape=3, m=2

Outdata-Shape3-mrcImageSiemensStar.png

Min

Max
Mean
SD

SE

-0.99729 (163, 123, 0)

0.999895 (163, 163, 0)
8.62013e-05
0.264724

0.00103408


Retrieved from "http://www.yasunaga-lab.bio.kyutech.ac.jp/Eos/index.php?title=mrcImageSiemensStar&oldid=3931"