Difference between revisions of "ctfEnvelopFunction"
From EosPedia
(Created page with "'''ctfEnvelopFunction''' is Eos's Command. == List of option == === Main option === <table border="1"> <tr> <th>Option</th> <th>Essential/Optional</th...") |
(→Execution example) |
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9.990112e-02 5.671023e-01 | 9.990112e-02 5.671023e-01 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -Rmax=== | === Option -Rmax=== | ||
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2.900000e-03 9.995211e-01 | 2.900000e-03 9.995211e-01 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-Rmax-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -dR=== | === Option -dR=== | ||
| Line 198: | Line 214: | ||
2.999999e-03 9.994875e-01 | 2.999999e-03 9.994875e-01 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-dR-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -kV=== | === Option -kV=== | ||
| Line 226: | Line 250: | ||
9.990112e-02 5.664985e-01 | 9.990112e-02 5.664985e-01 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-kV-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -Cs=== | === Option -Cs=== | ||
| Line 254: | Line 286: | ||
9.990112e-02 5.672638e-01 | 9.990112e-02 5.672638e-01 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-Cs-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -Ain=== | === Option -Ain=== | ||
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9.990112e-02 6.942782e-07 | 9.990112e-02 6.942782e-07 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-Ain-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
=== Option -ctfMode=== | === Option -ctfMode=== | ||
| Line 310: | Line 358: | ||
9.990112e-02 1.000000e+00 | 9.990112e-02 1.000000e+00 | ||
</pre> | </pre> | ||
| + | <table> | ||
| + | <tr> | ||
| + | <td><p align="center">[[File:Outdata-ctfMode64-ctfEnvelopFunction.png]]<br> | ||
| + | By gnuplot<br></p> | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <br> | ||
Latest revision as of 07:30, 29 September 2014
ctfEnvelopFunction is Eos's Command.
Contents
List of option
Main option
| Option | Essential/Optional | Description | Default |
|---|---|---|---|
| -o | Optional | Output: ASCII | stdout |
| -Rmax | Optional | max Spatial frequency: [/A] | 0.1 |
| -dR | Optional | delta Spatial frequency: [/A] | 0.0001 |
| -kV | Optional | Acceleration voltage: [kV] | 200 |
| -Cs | Optional | Spherical aberration coefficient: [mm] | 1.7 |
| -df | Essential | Defocus: [A]:under(+) | 100000 |
| -A | Optional | AmplitudeContrast/PhaseContrast | 0.0 |
| -Ain | Optional | Illumination Aperture[mrad] | 0.02 |
| -ctfMode | Optional | CTFMode | 32 |
| -c | Optional | ConfigurationFile | NULL |
| -m | Optional | Mode | 0 |
| -h | Optional | Help |
-m details
| Value | Description |
|---|---|
| 0 |
CTFMode details
| Value | Description |
|---|---|
| 32 | with Illumination Aperture |
| 64 | with Energy Spread |
Execution example
Case: Options only essential
Case: df=100000
0.000000e+00 1.000000e+00 1.000000e-04 9.999994e-01 2.000000e-04 9.999977e-01 3.000000e-04 9.999949e-01 4.000000e-04 9.999909e-01 5.000000e-04 9.999858e-01 6.000000e-04 9.999795e-01 7.000000e-04 9.999721e-01 8.000000e-04 9.999635e-01 9.000000e-04 9.999539e-01 ... 9.900110e-02 5.728893e-01 9.910110e-02 5.722460e-01 9.920111e-02 5.716026e-01 9.930111e-02 5.709595e-01 9.940111e-02 5.703164e-01 9.950111e-02 5.696734e-01 9.960111e-02 5.690305e-01 9.970111e-02 5.683877e-01 9.980112e-02 5.677449e-01 9.990112e-02 5.671023e-01
|
Option -Rmax
Case: Rmax=0.003, df=100000
0.000000e+00 1.000000e+00 1.000000e-04 9.999994e-01 2.000000e-04 9.999977e-01 3.000000e-04 9.999949e-01 4.000000e-04 9.999909e-01 5.000000e-04 9.999858e-01 6.000000e-04 9.999795e-01 7.000000e-04 9.999721e-01 8.000000e-04 9.999635e-01 9.000000e-04 9.999539e-01 9.999999e-04 9.999430e-01 1.100000e-03 9.999311e-01 1.200000e-03 9.999180e-01 1.300000e-03 9.999037e-01 1.400000e-03 9.998884e-01 1.500000e-03 9.998719e-01 1.600000e-03 9.998542e-01 1.700000e-03 9.998354e-01 1.800000e-03 9.998155e-01 1.899999e-03 9.997944e-01 1.999999e-03 9.997722e-01 2.099999e-03 9.997489e-01 2.200000e-03 9.997244e-01 2.300000e-03 9.996988e-01 2.400000e-03 9.996720e-01 2.500000e-03 9.996441e-01 2.600000e-03 9.996151e-01 2.700000e-03 9.995849e-01 2.800000e-03 9.995536e-01 2.900000e-03 9.995211e-01
|
Option -dR
Case: dR=0.0002, Rmax=0.003, df=100000
0.000000e+00 1.000000e+00 2.000000e-04 9.999977e-01 4.000000e-04 9.999909e-01 6.000000e-04 9.999795e-01 8.000000e-04 9.999635e-01 9.999999e-04 9.999430e-01 1.200000e-03 9.999180e-01 1.400000e-03 9.998884e-01 1.600000e-03 9.998542e-01 1.800000e-03 9.998155e-01 2.000000e-03 9.997722e-01 2.200000e-03 9.997244e-01 2.400000e-03 9.996720e-01 2.600000e-03 9.996151e-01 2.799999e-03 9.995536e-01 2.999999e-03 9.994875e-01
|
Option -kV
Case: kV=1000, df=100000
0.000000e+00 1.000000e+00 1.000000e-04 9.999994e-01 2.000000e-04 9.999977e-01 3.000000e-04 9.999949e-01 4.000000e-04 9.999909e-01 5.000000e-04 9.999858e-01 6.000000e-04 9.999795e-01 7.000000e-04 9.999721e-01 8.000000e-04 9.999635e-01 9.000000e-04 9.999539e-01 ... 9.900110e-02 5.723011e-01 9.910110e-02 5.716560e-01 9.920111e-02 5.710110e-01 9.930111e-02 5.703661e-01 9.940111e-02 5.697213e-01 9.950111e-02 5.690766e-01 9.960111e-02 5.684319e-01 9.970111e-02 5.677873e-01 9.980112e-02 5.671429e-01 9.990112e-02 5.664985e-01
|
Option -Cs
Case: Cs=2.1, df=100000
0.000000e+00 1.000000e+00 1.000000e-04 9.999994e-01 2.000000e-04 9.999977e-01 3.000000e-04 9.999949e-01 4.000000e-04 9.999909e-01 5.000000e-04 9.999858e-01 6.000000e-04 9.999795e-01 7.000000e-04 9.999721e-01 8.000000e-04 9.999635e-01 9.000000e-04 9.999539e-01 ... 9.900110e-02 5.730467e-01 9.910110e-02 5.724038e-01 9.920111e-02 5.717610e-01 9.930111e-02 5.711183e-01 9.940111e-02 5.704757e-01 9.950111e-02 5.698332e-01 9.960111e-02 5.691907e-01 9.970111e-02 5.685483e-01 9.980112e-02 5.679060e-01 9.990112e-02 5.672638e-01
|
Option -Ain
Case: Ain=0.1, df=100000
0.000000e+00 1.000000e+00 1.000000e-04 9.999858e-01 2.000000e-04 9.999430e-01 3.000000e-04 9.998719e-01 4.000000e-04 9.997722e-01 5.000000e-04 9.996441e-01 6.000000e-04 9.994875e-01 7.000000e-04 9.993026e-01 8.000000e-04 9.990891e-01 9.000000e-04 9.988473e-01 ... 9.900110e-02 8.948820e-07 9.910110e-02 8.700968e-07 9.920111e-02 8.459706e-07 9.930111e-02 8.224916e-07 9.940111e-02 7.996417e-07 9.950111e-02 7.774053e-07 9.960111e-02 7.557654e-07 9.970111e-02 7.347090e-07 9.980112e-02 7.142174e-07 9.990112e-02 6.942782e-07
|
Option -ctfMode
Case: ctfMode=64, df=100000
0.000000e+00 1.000000e+00 1.000000e-04 1.000000e+00 2.000000e-04 1.000000e+00 3.000000e-04 1.000000e+00 4.000000e-04 1.000000e+00 5.000000e-04 1.000000e+00 6.000000e-04 1.000000e+00 7.000000e-04 1.000000e+00 8.000000e-04 1.000000e+00 9.000000e-04 1.000000e+00 ... 9.900110e-02 1.000000e+00 9.910110e-02 1.000000e+00 9.920111e-02 1.000000e+00 9.930111e-02 1.000000e+00 9.940111e-02 1.000000e+00 9.950111e-02 1.000000e+00 9.960111e-02 1.000000e+00 9.970111e-02 1.000000e+00 9.980112e-02 1.000000e+00 9.990112e-02 1.000000e+00
|
