Difference between revisions of "ctfDisplay"
From EosPedia
| Line 19: | Line 19: | ||
<td>-o</td> | <td>-o</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>Input and Output: [[ASCII]](CTF Information)</td> |
<td>stdout</td> | <td>stdout</td> | ||
</tr> | </tr> | ||
Revision as of 04:59, 25 August 2014
ctfDisplay is one of Integration Tools(Integration Commands) for setting CTF Parameters (e.g. Defocus). There is the command that determines CTF Parameters automatically. But, In the case of low contrast or low SN-Ratio(e.g. using cryo-EM data), or checking automatically determined data as defocus, use it.
List of option
Main option
| Option | Essential/Optional | Description | Default |
|---|---|---|---|
| -i | Optional | Input: mrcImage(FFT) | NULL |
| -o | Optional | Input and Output: ASCII(CTF Information) | stdout |
| -Rmax | Optional | Rmax: [A-1] | 0.2 |
| -Imax | Optional | Intensity max | 0.2 |
| -Imin | Optional | Intensity min | 0.2 |
| -AutoRange | Optional | ||
| -Log | Optional | Log of Intensity | |
| -c | Optional | ConfigurationFile | NULL |
| -m | Optional | Mode | 0 |
| -h | Optional | Help |
-o 's Input and Output file can be used by mrcImageCTFCompensation.
-m details
| Value | Description |
|---|---|
| 0 |
