Difference between revisions of "mrcImageShrink"

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(Created page with "'''mrcImageShrink''' is収縮を行う Eos's Command. == List of option == <table border="1"> <div align="left"> <tr> <th>Option</th> <th>Essential/Option...")
 
 
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'''mrcImageShrink''' is収縮を行う [[Eos]]'s [[Command]].
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'''mrcImageShrink''' is [[Eos]]'s [[Command]] that shrinks.
 
 
 
== List of option ==
 
== List of option ==
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<td>-i</td>
 
<td>-i</td>
 
<td>Essential</td>
 
<td>Essential</td>
<td>Input設定: [[mrcImage]]</td>
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<td>Input: [[mrcImage]]</td>
 
<td>NULL</td>
 
<td>NULL</td>
 
</tr>
 
</tr>
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<td>-o</td>
 
<td>-o</td>
 
<td>Essential</td>
 
<td>Essential</td>
<td>Output設定: [[mrcImage]]</td>
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<td>Output: [[mrcImage]]</td>
 
<td>NULL</td>
 
<td>NULL</td>
 
</tr>
 
</tr>
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<td>-S</td>
 
<td>-S</td>
 
<td>Optional</td>
 
<td>Optional</td>
<td>ピクセルサイズの値を設定(x,y,z軸すべて同じ値になる)</td>
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<td>Shrink(1/S) for x, y ,z axis</td>
 
<td>2</td>
 
<td>2</td>
 
</tr>
 
</tr>
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<td>-Sx</td>
 
<td>-Sx</td>
 
<td>Optional</td>
 
<td>Optional</td>
<td>ピクセルサイズのx軸の値を設定</td>
+
<td>Shrink(1/S) for x axis.</td>
 
<td>2</td>
 
<td>2</td>
 
</tr>
 
</tr>
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<td>-Sy</td>
 
<td>-Sy</td>
 
<td>Optional</td>
 
<td>Optional</td>
<td>ピクセルサイズのy軸の値を設定</td>
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<td>Shrink(1/S) for y axis.</td>
 
<td>2</td>
 
<td>2</td>
 
</tr>
 
</tr>
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<td>-Sz</td>
 
<td>-Sz</td>
 
<td>Optional</td>
 
<td>Optional</td>
<td>ピクセルサイズのz軸の値を設定</td>
+
<td>Shrink(1/S) for z axis.</td>
 
<td>2</td>
 
<td>2</td>
 
</tr>
 
</tr>
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</table>
 
</table>
 
<br>
 
<br>
====●画素数をmrcInfoで表示した結果====
+
====●View about pixel data by mrcInfo====
 
<pre>
 
<pre>
 
N            : (      250,      1046,          1)
 
N            : (      250,      1046,          1)
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</pre>
 
</pre>
  
===------Output------===
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===------Example of options only essential------===
 
<table>
 
<table>
 
<tr>
 
<tr>
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</table>
 
</table>
 
<br>
 
<br>
====●画素数をmrcInfoで表示した結果====
+
====●View about pixel data by mrcInfo====
 
<pre>
 
<pre>
 
N            : (      125,        523,          1)
 
N            : (      125,        523,          1)
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</pre>
 
</pre>
  
<div>オプションでピクセルサイズの値を指定していないので、<br>
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<div>It shrinks at ratio 2 by default.</div>
デフォルトの2で収縮される</div>
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===------ピクセルサイズを指定(オプション -S)------===
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===------Option -S (Setting the pixel size)------===
====値を10にして実行====
+
====Case: S=10====
 
<table>
 
<table>
 
<tr>
 
<tr>
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</table>
 
</table>
 
<br>
 
<br>
====●画素数をmrcInfoで表示した結果====
+
====●View about pixel data by mrcInfo====
 
<pre>
 
<pre>
 
N            : (        25,        104,          1)
 
N            : (        25,        104,          1)
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</pre>
 
</pre>
  
===------各軸のピクセルサイズを別々に指定(オプション -Sx,-Sy,-Sz)------===
+
===------Option -Sx,-Sy,-Sz (Setting the pixel size each axis)------===
====x軸の値を3、y軸の値を5にして実行====
+
====Case: Sx=3, Sy=5====
 
<table>
 
<table>
 
<tr>
 
<tr>

Latest revision as of 02:37, 31 July 2014

mrcImageShrink is Eos's Command that shrinks.

List of option

Option Essential/Optional Description Default
-i Essential Input: mrcImage NULL
-o Essential Output: mrcImage NULL
-S Optional Shrink(1/S) for x, y ,z axis 2
-Sx Optional Shrink(1/S) for x axis. 2
-Sy Optional Shrink(1/S) for y axis. 2
-Sz Optional Shrink(1/S) for z axis. 2
-h Optional Help  
Option -S takes priority over -Sx, -Sy, -Sz.


Execution example

------Input file's image------

000150 0101-001.I.roi-mrcImageShrink.png

Min

Max
Mean
SD

SE

0

2.40654
0.331372
0.183364

0.000358573


●View about pixel data by mrcInfo

N            : (       250,       1046,          1)
Mode         :           0  mrcCharImage         
StartN       : (         0,          0,          0)
M            : (         1,          1,          1)
Length       : (     2.500,      2.500,      2.500)
A,B,G        : (     90.00,      90.00,      90.00)
C,R,S        : (         1,          2,          3)
Min,Max,Mean : (         0,        255,       34.6)
ISPG         :           0
NSYMBT       :           0
EXTRA        :   0: 0         	 1: 0         	 2: 0         	 3: 0         	 4: 0         	 5: 0         	 6: 0         	 7: 0         	 8: 0         	 9: 0         	10: 0         	11: 0         	12: 0         	13: 0         	14: 0         	15: 0         	16: 0         	17: 0         	18: 0         	19: 0         	20: 0         	21: 0         	22: 0         	23: 0         	24: 0         	25: 0         	26: 0         	27: 0         	28: 0         	
XORIGIN      : (         0,          0)
XORIGIN      : (         0, 1717240225)
LABEL        :           0
Tailer Number: 0

------Example of options only essential------

Test.shrink-mrcImageShrink.png

Min

Max
Mean
SD

SE

0.0190035

1.66372
0.331372
0.151921

0.000594173


●View about pixel data by mrcInfo

N            : (       125,        523,          1)
Mode         :           0  mrcCharImage         
StartN       : (         0,          0,          0)
M            : (         1,          1,          1)
Length       : (     2.500,      2.500,      2.500)
A,B,G        : (     90.00,      90.00,      90.00)
C,R,S        : (         1,          2,          3)
Min,Max,Mean : (         0,        255,       47.9)
ISPG         :           0
NSYMBT       :           0
EXTRA        :   0: 0         	 1: 0         	 2: 0         	 3: 0         	 4: 0         	 5: 0         	 6: 0         	 7: 0         	 8: 0         	 9: 0         	10: 0         	11: 0         	12: 0         	13: 0         	14: 0         	15: 0         	16: 0         	17: 0         	18: 0         	19: 0         	20: 0         	21: 0         	22: 0         	23: 0         	24: 0         	25: 0         	26: 0         	27: 0         	28: 0         	
XORIGIN      : (         0,          0)
XORIGIN      : (         0,  885914144)
LABEL        :           0
Tailer Number: 0
It shrinks at ratio 2 by default.

------Option -S (Setting the pixel size)------

Case: S=10

Test.S10.shrink-mrcImageShrink.png

Min

Max
Mean
SD

SE

0.164437

0.856332
0.331082
0.0903754

0.00177241


●View about pixel data by mrcInfo

N            : (        25,        104,          1)
Mode         :           0  mrcCharImage         
StartN       : (         0,          0,          0)
M            : (         1,          1,          1)
Length       : (     2.500,      2.500,      2.500)
A,B,G        : (     90.00,      90.00,      90.00)
C,R,S        : (         1,          2,          3)
Min,Max,Mean : (         0,        255,       60.9)
ISPG         :           0
NSYMBT       :           0
EXTRA        :   0: 0         	 1: 0         	 2: 0         	 3: 0         	 4: 0         	 5: 0         	 6: 0         	 7: 0         	 8: 0         	 9: 0         	10: 0         	11: 0         	12: 0         	13: 0         	14: 0         	15: 0         	16: 0         	17: 0         	18: 0         	19: 0         	20: 0         	21: 0         	22: 0         	23: 0         	24: 0         	25: 0         	26: 0         	27: 0         	28: 0         	
XORIGIN      : (         0,          0)
XORIGIN      : (         0, -1005592619)
LABEL        :           0
Tailer Number: 0

------Option -Sx,-Sy,-Sz (Setting the pixel size each axis)------

Case: Sx=3, Sy=5

Test.x3y5.shrink-mrcImageShrink.png

Min

Max
Mean
SD

SE

0.0726836

1.24973
0.331489
0.123327

0.000936368

●View about pixel data by mrcInfo

N            : (        83,        209,          1)
Mode         :           0  mrcCharImage         
StartN       : (         0,          0,          0)
M            : (         1,          1,          1)
Length       : (     2.500,      2.500,      2.500)
A,B,G        : (     90.00,      90.00,      90.00)
C,R,S        : (         1,          2,          3)
Min,Max,Mean : (         0,        254,       55.6)
ISPG         :           0
NSYMBT       :           0
EXTRA        :   0: 0         	 1: 0         	 2: 0         	 3: 0         	 4: 0         	 5: 0         	 6: 0         	 7: 0         	 8: 0         	 9: 0         	10: 0         	11: 0         	12: 0         	13: 0         	14: 0         	15: 0         	16: 0         	17: 0         	18: 0         	19: 0         	20: 0         	21: 0         	22: 0         	23: 0         	24: 0         	25: 0         	26: 0         	27: 0         	28: 0         	
XORIGIN      : (         0,          0)
XORIGIN      : (         0,   69618417)
LABEL        :           0
Tailer Number: 0
*A part of decimal of Input file's pixel size calculated is omitted.