mrcImageConnectivityNumberCalc

mrcImageConnectivityNumberCalc is Eos's Command that calculates connectivity number.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-o	Essential	Output: mrcImage	NULL
-m	Optional	Mode	0
-f	Optional	Form	0
-I	Optional	Invers	0
-h	Optional	Help

-m details

Value	Description
0	Four Neighborhood. [default]
1	Eight Nieghborhood.
2	Eighteen Neighborhood.

*0, 1: for 2-Dimension, 2: for 3-Dimension

-f details

Value	Description
0	No change. [default]
1	Spread of pixel data 1.
2	Thin of pixel data 1.
3	Frame of image by data 1.

-I details

Value	Description
0	The object is 1 value. [default]
1	The background is 1 value.

Execution example

------Input file's image------

Using the binary image as input file.

Min Max Mean SD SE

0 1 0.236406 0.424874 0.00531093

------Option -f------

Case: f=0

Min Max Mean SD SE

0 1 0.236406 0.424874 0.00531093

Case: f=1

Min Max Mean SD SE

0 1 0.260937 0.439146 0.00548932

Case: f=2

Min Max Mean SD SE

0 1 0.203281 0.40244 0.0050305

Case: f=3

Min Max Mean SD SE

0 1 0.03375 0.180585 0.00225731

------Option -I------

Case: I=0

Min Max Mean SD SE

0 1 0.236406 0.424874 0.00531093

Case: I=1

Min Max Mean SD SE

0 1 0.763594 0.424874 0.00531093

------Option -m------

Case: f=1

Case: m=0

Min Max Mean SD SE

0 1 0.260937 0.439146 0.00548932

Case: m=1

Min Max Mean SD SE

0 1 0.271094 0.439146 0.00548932

m=2 is for 3D image. It doesn't effect this time, because the image is 2D image.