mrcImageGaussSphere

mrcImageGaussSphere is Eos's Command that creates a Gauss Sphere.

List of option

Main option

Option	Essential/Optional	NULL	Default
-o	Essential	Output: mrcImage	NULL
-sigmax	Optional	sigmax[A]	10
-sigmay	Optional	sigmay[A]	20
-sigmaz	Optional	sigmaz[A]	30
-sigma_range	Optional	x times	3
-weight	Optional	weight	10
-size	Optional	Pixel Size[A]	5
-W	Optional	Width[A]	0
-H	Optional	Height[A]	0
-S	Optional	Section[A]	0
-m	Optional	Mode	2
-h	Optional	Help

mrcImageFileSize＝(sigma_range*sigmax*2) x (sigma_range*sigmay*2) x (sigma_range*sigmaz*2)

-m details

Value	Description
0	char (1 byte)
2	float (4 bytes)

Execution example

------Example of options only essential------

Min Max Mean SD SE

1.87953e-11 10 0.222265 0.858162 0.00782576

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

1.523e-07 10 0.773306 1.80792 0.100285

------Option -sigmax,-sigmay,-sigmaz------

Case: -sigmax=50,-sigmay=50,-sigmaz=50

Min Max Mean SD SE

1.87953e-11 10 0.24531 0.898424 0.00188576

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

1.523e-07 10 0.84426 1.87314 0.0307072

------Option -sigma_range------

Case: -sigmax=50,-sigmay=50,-sigmaz=1

Case: -sigma_range=3 (default)

Min Max Mean SD SE

2.94008e-10 0.0193046 0.00162981 0.00361602 4.19165e-05

Case: -sigma_range=2

Min Max Mean SD SE

0.00335463 0.0193046 0.00162981 0.00361602 4.19165e-05

------Option -weight------

Case: -sigmax=50,-sigmay=50,-sigmaz=1

Case: -weight=10 (default)

Min Max Mean SD SE

2.94008e-10 0.0193046 0.00162981 0.00361602 4.19165e-05

Case: -weight=30

Min Max Mean SD SE

8.82023e-10 0.0579137 0.00488942 0.010848 0.00012575

------Option -size------

Case: -sigmaz=1

Case: -size=1

Min Max Mean SD SE

1.87953e-11 10 0.215562 0.852389 0.00375

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

1.523e-07 10 0.851235 1.87929 0.0218744

------Option -W,-H------

Case: -sigmax=50,-sigmay=50,-sigmaz=1

Case: -W=500,-H=500,-S=500

Min Max Mean SD SE

0 0.0192083 1.21294e-05 0.000341949 3.41949e-07

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

1.00707e-23 0.0192083 0.00060647 0.00234222 2.34222e-05

The default of -size is 5. Therefore the width of x, y and z are 100.

------Option -m------

Case: -sigmax=50,-sigmay=50,-sigmaz=50

Case: m=0

Min Max Mean SD SE

0 9 0.0378 0.38963 0.00038963

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

0 9 0.2476 1.10666 0.0110666

Case: m=2

Min Max Mean SD SE

1.19151e-31 9.92528 0.0556833 0.440193 0.000440193

the slice of z-axis central portion 　　－－－－－－＞

Min Max Mean SD SE

5.20371e-21 9.92528 0.313375 1.21027 0.0121027