mrcImageOrientationSearchByHybridization

mrcImageOrientationSearchByHybridization is Eos's Command.

List of option

Main option

Option	Essential/Optional	Description	Default
-I	Essential	Input: ASCII(File List)	NULL
-o	Essential	Output(Header)	NULL
-e	Essential	Output(Extension)	NULL
-ir	Optional	IncreaseRate	1
-hpn	Optional	HybridizationPointNumber(The number of hybridization points)	1
-ms	Optional	ModeOfSelection	0
-ird	Optional	InitialRandomData	0
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-m details

Value	Description
0	create children angle file
1	do not create children angle file , create match angle file

-ir details

Value	Description
1	Increase number is 45 (filenum = 10)
2	Increase number is 90 (filenum = 10)

-ms details

Value	Description
0	random
1	myself (-ird)

-I format

childrenfile0
childrenfile1
.
.
.

childrenfile format

filename RotMode  phi  theta  psi
     .               .          .       .       .
     .               .          .       .       .
     .               .          .       .       .

Execution example

Input file's data

/Eos/Input-file0.txt
/Eos/Input-file1.txt

Input-file0.txt's data

/Eos/img/Input0	ZONS	0	0	0
/Eos/img/Input1	ZONS	0	45	0
/Eos/img/Input2	ZONS	0	0	45

Input-file1.txt's data

/Eos/img/Input3	ZONS	90	0	0
/Eos/img/Input4	ZONS	90	30	0
/Eos/img/Input5	ZONS	90	60	0

Example of options only essential

Output

       1.000000        0.000000        0.000000 
       0.000000        1.000000        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       0.707107        0.000000        0.707107 
       0.000000        1.000000        0.000000 
      -0.707107        0.000000        0.707107 
       0.000000        0.000000        0.000000 
       0.707107       -0.707107        0.000000 
       0.707107        0.707107        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       1.000000        0.000000        0.000000 
       0.000000        1.000000        0.000000 
       0.000000        0.000000        1.000000 
       0.000000        0.000000        0.000000 
       1.000000       -0.000000       -0.000000 
      -0.000000        0.866025       -0.500000 
       0.000000        0.500000        0.866025 
       0.000000        0.000000        0.000000 
       1.000000       -0.000000       -0.000000 
      -0.000000        0.500000       -0.866025 
       0.000000        0.866025        0.500000 
       0.000000        0.000000        0.000000 
HybridizationPoint = 1 FileNum = 1

In case of o=/Eos/Outdata, e=txt, it outputs by filename as the following.

/Eos/Outdata-0.txt
/Eos/Outdata-1.txt
/Eos/Outdata-2.txt

Outdata-0.txt's data

/Eos/img/Input3 ZONS   0.0   0.0   0.0
/Eos/img/Input1 ZONS   0.0  45.0   0.0
/Eos/img/Input2 ZONS  45.0   0.0   0.0

Outdata-1.txt's data

/Eos/img/Input0 ZONS   0.0   0.0   0.0
/Eos/img/Input1 ZONS   0.0  45.0   0.0
/Eos/img/Input2 ZONS  45.0   0.0   0.0

Outdata-2.txt's data

/Eos/img/Input3 ZONS   0.0   0.0   0.0
/Eos/img/Input4 ZONS  90.0  30.0 270.0
/Eos/img/Input5 ZONS  90.0  60.0 270.0