lmrcImageCorrelation(API) - 変更履歴

Kinoshita: /* API */

2015-03-09T05:04:48Z

‎API

Kinoshita: /* API */

2015-03-03T02:54:03Z

‎API

2014年5月16日 (金) 01:00にKinoshitaによる

2014-05-16T01:00:45Z

2014年5月16日 (金) 00:12にKinoshitaによる

2014-05-16T00:12:08Z

2014年5月9日 (金) 08:38にKinoshitaによる

2014-05-09T08:38:59Z

2014年5月9日 (金) 08:32にKinoshitaによる

2014-05-09T08:32:37Z

Kinoshita: ページの作成:「DataManip/mrcImage/src/'''lmrcImageCorrelation'''はmrcImage同士での相関を行うのためのAPI です。mrcImageCorrelationやmrcImageAutoRotationCorrel...」

2014-05-09T08:31:17Z

ページの作成:「DataManip/mrcImage/src/'''lmrcImageCorrelation'''はmrcImage同士での相関を行うのためのAPI です。mrcImageCorrelationやmrcImageAutoRotationCorrel...」

新規ページ

DataManip/mrcImage/src/'''lmrcImageCorrelation'''は[[mrcImage]]同士での相関を行うのためのAPI です。[[mrcImageCorrelation]]や[[mrcImageAutoRotationCorrelation]]だけでなく、[[クラスター解析]]などでも使用されています。

== 定数 ==

== 構造体 ==
typedef enum lmrcImageAutoRotationCorrelationMethod {
lmrcImageAutoRotationCorrelationMethodRotationAndCorrelation = 0,
lmrcImageAutoRotationCorrelationMethodRotationAndCorrelationSSDA = 1,
lmrcImageAutoRotationCorrelationMethodRotationalFunction = 2
} lmrcImageAutoRotationCorrelationMethod;

typedef struct lmrcImageAutoRotationCorrelationInfo {
int iter; /* iteration */
int nRot; /* Rotation */
lmrcImageAutoRotationCorrelationMethod Method;
float max;
float maxTheta;
mrcImageParaTypeRealCoord maxP;
mrcImageInformation corInfo;
lmrcImageSSDAInfo SSDAInfo;
float EuclidDistance;
float LinearCorrelation;

/* Restriction Rotation Area */
int flagRestrictionArea;
float thetaMin;
float thetaMax;

int flagShiftRange;
float shiftMinX;
float shiftMinY;
float shiftMaxX;
float shiftMaxY;

int flagXshiftOnly;
int flagNoShift;

} lmrcImageAutoRotationCorrelationInfo;

typedef struct lmrcImageCorrelationRefinementInfo {
mrcImageParaTypeRealCoord shift;
mrcImageParaTypeRealCoord step;
mrcImageParaTypeRealCoord range;
mrcImageInformation corInfo;
int mode;
} lmrcImageCorrelationRefinementInfo;

typedef enum lmrcImageAutoRotationCorrelationForManyReferencesRotationOrder {
lmrcImageAutoRotationCorrelationForManyReferencesStackOrderRot1Rot2Rot3=0,
lmrcImageAutoRotationCorrelationForManyReferencesStackOrderRot3Rot2Rot1=1
} lmrcImageAutoRotationCorrelationForManyReferencesStackOrder;

typedef enum lmrcImageAutoRotationCorrelationForManyReferencesRefinementMode {
lmrcImageAutoRotationCorrelationForManyReferencesRefinementModeLinear =0,
lmrcImageAutoRotationCorrelationForManyReferencesRefinementModeSetMode =1
} lmrcImageAutoRotationCorrelationForManyReferencesRefinementMode;

typedef struct lmrcImageAutoRotationCorrelationForManyReferencesInfo {
int nRot1; /* Image Number in Ref*/
int nRot1Step; /* Coarse Step in Fitting */
double nRot1AreaMin; /* Min: Rotation Area in Fitting */
double nRot1AreaMax; /* Max: Rotation Area in Fitting */
double nRot1AreaStep; /* Step: Rotation Area in Fitting */
double nRot1Delta; /* Delta: Rotation Interval of Ref */
double nRot1Start; /* Start: Rotation Interval of Ref */

int nRot2;
int nRot2Step;
double nRot2AreaMin;
double nRot2AreaMax;
double nRot2AreaStep;
double nRot2Delta;
double nRot2Start;

int nRot3;
int nRot3Step;
double nRot3AreaMin;
double nRot3AreaMax;
double nRot3AreaStep;
double nRot3Delta;
double nRot3Start;

int mode;

lmrcImageAutoRotationCorrelationForManyReferencesStackOrder StackOrder;
lmrcImageAutoRotationCorrelationForManyReferencesRefinementMode RefinementMode;

char* In;
FILE* fptOutASC; /* a file pointer for logging */
char* Out;
mrcImage out;

/* for Linear Correlation */
char* corFile;
mrcImage cor;
char* fitFile;
mrcImage fittedMap;

/* for Set mode correlation */
char* corFile2;
mrcImage cor2;
char* fitFile2;
mrcImage fittedMap2;

} lmrcImageAutoRotationCorrelationForManyReferencesInfo;

#ifdef PVM

typedef struct lmrcImageCorrelationPVMInfo {
int* tids;
int numTask;
} lmrcImageCorrelationPVMInfo;

#endif

== API ==
extern void lmrcImageAutoRotationCorrelation(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
extern void lmrcImageAutoRotationCorrelationRotationalCrossCorrelationFunction(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
extern double lmrcImageLinearCorrelation(mrcImage* in1, mrcImage* in2, long mode);
extern void lmrcImageCorrelation(mrcImage* cor, mrcImage* in, mrcImage* ref, long mode);
extern double lmrcImageEuclidDistanceCalc(mrcImage* in1, mrcImage* in2, int mode);
extern void lmrcImageCorrelationRefinement(mrcImage* cor, mrcImage* shift, mrcImage* in, mrcImage* ref, lmrcImageCorrelationRefinementInfo* info, long mode);

#ifdef PVM
extern void lmrcImageCorrelationServerStart(lmrcImageCorrelationPVMInfo* linfo, FILE* fpt, int numTask);
extern void lmrcImageCorrelationServerEnd(lmrcImageCorrelationPVMInfo linfo);

extern void lmrcImageCorrelationPVMStart(mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);
extern void lmrcImageCorrelationPVMEnd(mrcImage* out, mrcImage* cor, lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);

extern void lmrcImageCorrelationServer();

extern void lmrcImageAutoRotationCorrelationInfoSendByPVM(lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);
extern void lmrcImageAutoRotationCorrelationInfoRecieveByPVM(lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);

#endif

extern void lmrcImageAutoRotationCorretionForManyReferences(mrcImage* in, mrcImage* ref,
lmrcImageAutoRotationCorrelationForManyReferencesInfo* info,
lmrcImageAutoRotationCorrelationInfo* linfo,
int mode);

←前の版		2014年5月9日 (金) 08:32時点における版
行1:		行1:
−	DataManip/mrcImage/src/'''lmrcImageCorrelation'''は[[mrcImage]]同士での相関を行うのためのAPI です。[[mrcImageCorrelation]]や[[mrcImageAutoRotationCorrelation]]だけでなく、[[クラスター解析]]~~などでも使用されています。~~	+	DataManip/mrcImage/src/'''lmrcImageCorrelation'''は[[mrcImage]]同士での相関を行うのためのAPI です。[[mrcImageCorrelation]]や[[mrcImageAutoRotationCorrelation]]だけでなく、[[クラスター解析]]など画像間の関係を定義したい場合でも使用します。

	== 定数 ==		== 定数 ==

@@ 行119: / 行119: @@
 == API ==
-AutoRotationCorrelation
+==== 画像間の相関 ====
-  extern void lmrcImageAutoRotationCorrelation(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
+  extern void lmrcImageCorrelation(mrcImage* cor, mrcImage* in, mrcImage* ref, long mode);
- extern void lmrcImageAutoRotationCorrelationRotationalCrossCorrelationFunction(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
+線形相関
   extern double lmrcImageLinearCorrelation(mrcImage* in1, mrcImage* in2, long mode);
   extern void lmrcImageLinearCorrelation2(double* cor, mrcImage* in1, mrcImage* in2, long mode);
- extern void lmrcImageCorrelation(mrcImage* cor, mrcImage* in, mrcImage* ref, long mode);
+ユークリッド距離による相関
   extern double lmrcImageEuclidDistanceCalc(mrcImage* in1, mrcImage* in2, int mode);
   extern void lmrcImageEuclidDistanceCalc2(double* cor, mrcImage* in1, mrcImage* in2, int mode);
   extern void lmrcImageCorrelationRefinement(mrcImage* cor, mrcImage* shift, mrcImage* in, mrcImage* ref, lmrcImageCorrelationRefinementInfo* info, long mode);
 複数の参照ファイルを使用するとき
   extern void lmrcImageAutoRotationCorretionForManyReferences(mrcImage* in, mrcImage* ref,

@@ 行5: / 行5: @@
 == 構造体 ==
 ===相関方法===
   typedef enum lmrcImageAutoRotationCorrelationMethod {
   	lmrcImageAutoRotationCorrelationMethodRotationAndCorrelation     = 0,
@@ 行12: / 行13: @@
 ===相関情報===
   typedef struct lmrcImageAutoRotationCorrelationInfo {
   	int iter; /* iteration */
@@ 行39: / 行41: @@
   } lmrcImageAutoRotationCorrelationInfo;
   typedef struct lmrcImageCorrelationRefinementInfo {
   	mrcImageParaTypeRealCoord shift;
@@ 行105: / 行108: @@
   	mrcImage fittedMap2;
- 	} lmrcImageAutoRotationCorrelationForManyReferencesInfo;
+ } lmrcImageAutoRotationCorrelationForManyReferencesInfo;
-===PVM===
+===PVMインストール時のみ使用可===
   #ifdef PVM
   typedef struct lmrcImageCorrelationPVMInfo {
@@ 行116: / 行119: @@
 == API ==
   extern void lmrcImageAutoRotationCorrelation(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
   extern void lmrcImageAutoRotationCorrelationRotationalCrossCorrelationFunction(mrcImage* out, mrcImage* cor, mrcImage* in, mrcImage* ref, lmrcImageAutoRotationCorrelationInfo* linfo, int mode);
@@ 行123: / 行127: @@
   extern void lmrcImageCorrelationRefinement(mrcImage* cor, mrcImage* shift, mrcImage* in, mrcImage* ref, lmrcImageCorrelationRefinementInfo* info, long mode);
-===PVM===
+複数の参照ファイルを使用するとき
   #ifdef PVM
   extern void lmrcImageCorrelationServerStart(lmrcImageCorrelationPVMInfo* linfo, FILE* fpt, int numTask);
@@ 行136: / 行146: @@
   extern void lmrcImageAutoRotationCorrelationInfoRecieveByPVM(lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);
   #endif

@@ 行59: / 行59: @@
   typedef struct lmrcImageAutoRotationCorrelationForManyReferencesInfo {
-     int    nRot1;           /* Image Number in Ref*/
+ 	int    nRot1;           /* Image Number in Ref*/
-     int    nRot1Step;       /* Coarse Step in Fitting */
+ 	int    nRot1Step;       /* Coarse Step in Fitting */
-     double nRot1AreaMin;    /* Min: Rotation Area in Fitting */
+ 	double nRot1AreaMin;    /* Min: Rotation Area in Fitting */
-     double nRot1AreaMax;    /* Max: Rotation Area in Fitting */
+ 	double nRot1AreaMax;    /* Max: Rotation Area in Fitting */
-     double nRot1AreaStep;   /* Step: Rotation Area in Fitting */
+ 	double nRot1AreaStep;   /* Step: Rotation Area in Fitting */
   	double nRot1Delta;      /* Delta: Rotation Interval of Ref */
   	double nRot1Start;      /* Start: Rotation Interval of Ref */
-     int    nRot2;
+ 	int    nRot2;
-     int    nRot2Step;
+ 	int    nRot2Step;
-     double nRot2AreaMin;
+ 	double nRot2AreaMin;
-     double nRot2AreaMax;
+ 	double nRot2AreaMax;
-     double nRot2AreaStep;
+ 	double nRot2AreaStep;
   	double nRot2Delta;
   	double nRot2Start;
-     int    nRot3;
+ 	int    nRot3;
-     int    nRot3Step;
+ 	int    nRot3Step;
-     double nRot3AreaMin;
+ 	double nRot3AreaMin;
-     double nRot3AreaMax;
+ 	double nRot3AreaMax;
-     double nRot3AreaStep;
+ 	double nRot3AreaStep;
   	double nRot3Delta;
   	double nRot3Start;
-     int mode;
+ 	int mode;
   	lmrcImageAutoRotationCorrelationForManyReferencesStackOrder StackOrder;
   	lmrcImageAutoRotationCorrelationForManyReferencesRefinementMode RefinementMode;
-     char* In;
+ 	char* In;
-     FILE* fptOutASC; /* a file pointer for logging */
+ 	FILE* fptOutASC; /* a file pointer for logging */
-     char* Out;
+ 	char* Out;
-     mrcImage out;
+ 	mrcImage out;
   	/* for Linear Correlation */
-     char* corFile;
+ 	char* corFile;
-     mrcImage cor;
+ 	mrcImage cor;
-     char* fitFile;
+ 	char* fitFile;
-     mrcImage fittedMap;
+ 	mrcImage fittedMap;
   	/* for Set mode correlation */
-     char* corFile2;
+ 	char* corFile2;
-     mrcImage cor2;
+ 	mrcImage cor2;
-     char* fitFile2;
+ 	char* fitFile2;
-     mrcImage fittedMap2;
+ 	mrcImage fittedMap2;
- } lmrcImageAutoRotationCorrelationForManyReferencesInfo;
+ 	} lmrcImageAutoRotationCorrelationForManyReferencesInfo;
 ===PVM===

@@ 行4: / 行4: @@
 == 構造体 ==
   typedef enum lmrcImageAutoRotationCorrelationMethod {
   	lmrcImageAutoRotationCorrelationMethodRotationAndCorrelation     = 0,
@@ 行10: / 行11: @@
   } lmrcImageAutoRotationCorrelationMethod;
   typedef struct lmrcImageAutoRotationCorrelationInfo {
   	int iter; /* iteration */
@@ 行35: / 行37: @@
   	int   flagXshiftOnly;
   	int   flagNoShift;
   } lmrcImageAutoRotationCorrelationInfo;
@@ 行46: / 行47: @@
   } lmrcImageCorrelationRefinementInfo;
   typedef enum lmrcImageAutoRotationCorrelationForManyReferencesRotationOrder {
   	 lmrcImageAutoRotationCorrelationForManyReferencesStackOrderRot1Rot2Rot3=0,
@@ 行105: / 行107: @@
   } lmrcImageAutoRotationCorrelationForManyReferencesInfo;
   #ifdef PVM
   typedef struct lmrcImageCorrelationPVMInfo {
   	int* tids;
   	int  numTask;
   } lmrcImageCorrelationPVMInfo;
   #endif
@@ 行122: / 行123: @@
   extern void lmrcImageCorrelationRefinement(mrcImage* cor, mrcImage* shift, mrcImage* in, mrcImage* ref, lmrcImageCorrelationRefinementInfo* info, long mode);
   #ifdef PVM
   extern void lmrcImageCorrelationServerStart(lmrcImageCorrelationPVMInfo* linfo, FILE* fpt, int numTask);
@@ 行133: / 行135: @@
   extern void lmrcImageAutoRotationCorrelationInfoSendByPVM(lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);
   extern void lmrcImageAutoRotationCorrelationInfoRecieveByPVM(lmrcImageAutoRotationCorrelationInfo* linfo, int tid, long mode);
   #endif
   extern void lmrcImageAutoRotationCorretionForManyReferences(mrcImage* in, mrcImage* ref,