コマンド一覧

提供: Eospedia
2010年11月9日 (火) 02:56時点におけるAdmin (トーク | 投稿記録)による版

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Eosに実装されているコマンドの一覧。

  • CTFDetermination
  • CheckCommonLineData
  • CheckOfOrientation
  • CheckOrientationByDegree
  • Chie
  • CommonLineCalculation
  • CommonLineRankCalc_k
  • Decartes2Polar
  • Descartes2Polar
  • Display2
  • Display3
  • Eos
  • EvaluateCorrelationMapwithCommonLine
  • FAQ
  • FETOrientationSearchByAnnealing
  • FETOrientationSearchByFeatureAlignment
  • FETmapOrientationSearchBySimultaneousFitting
  • FETsmallMapSetCreate_forSimultaneousMinimization
  • LCalculationForOrientationSearch
  • Polar2Decartes
  • Polar2Descartes
  • ProjectionDirectionMapCreate
  • RTeranishi
  • StereoDisplay
  • [[TestForLcalculationOfOrientationSearchBySimultaneousMinimization
  • [[Visualmake
  • [[WeightCalculationOfCommonLineSearch
  • [[WeightCalculationOfCommonLineSearchByAllSinogram
  • [[WeigthCaluculationOfCommonLineCalculation
  • [[angleMatchTest_k
  • [[anglediffcalc
  • [[anglediffchk
  • [[array2mrc
  • [[bin2mrc
  • [[class
  • [[clusterLog2ToLog
  • [[clusterLogASCII2Binary
  • [[clusterShow
  • [[coordRotation
  • [[ctfDeterminationFromMultiImage
  • [[ctfDeterminationFromPhaseComparison
  • [[ctfDeterminationFromThonRing
  • [[ctfDetermine
  • [[ctfDisplay
  • [[ctfEnvelopFunction
  • [[ctfFunction
  • [[ctfFunctionServer
  • [[ctfInfoSet
  • [[ctfMultiFunction
  • [[ctfWeightMapCreation
  • [[ctfZeroPoint
  • [[cufft
  • [[dataAnalysis_kayabuki
  • [[dcdAtomChangeDistanceFromAtom
  • [[dcdAtomDistanceDistribution
  • [[dcdCompareCA
  • [[dcdDistanceAtomBetweenAtom
  • [[dcdFilePrint
  • [[dcdInfo
  • [[dcdSelectAtoms
  • [[dcdSerectAtom
  • [[dcdTest
  • [[dcdTimeSeriesBehavior
  • [[defocusDeterminationFromThonRing
  • [[dos2unix
  • [[electronWaveLength
  • [[emData2mrc
  • [[energyTransferModelCheck
  • [[energyTransferModelResultCheck
  • [[fft2d
  • [[gmolvie
  • [[hf2000Init
  • [[hf2000LenzCurrent
  • [[hf2000SpecimenPosition
  • [[hiromi
  • [[hiroshiImageProcessing
  • [[homology2PG
  • [[hostCondition
  • [[imagesView
  • [[ip2mrc
  • [[itami
  • [[kayabuki
  • [[khorosFilterGenerate
  • [[konson3
  • [[kuma
  • [[largeIPInfo
  • [[ll2ltlg
  • [[llDataAverage
  • [[llDataAxisSearch
  • [[llDataCTFCompensate
  • [[llDataCompare
  • [[llDataContributionCalcDifferentN
  • [[llDataDump
  • [[llDataEquatorAdd
  • [[llDataExtract
  • [[llDataFit
  • [[llDataFitServer
  • [[llDataInfo
  • [[llDataLowPassFiltering
  • [[llDataMultiCTFCompensation
  • [[llDataNEstimation
  • [[llDataNormalization
  • [[llDataPrint
  • [[llDataRescaling
  • [[llDataResolutionCheck
  • [[llDataRotation
  • [[llDataSelectionEstimation
  • [[llDataSeparate
  • [[llDataWeightSet
  • [[llDatarMaxLimit
  • [[llExtract
  • [[llExtractCtfinfFileCreate
  • [[llExtractCtrlFileCreate
  • [[llExtractWithLayerSeparation
  • [[llExtractWithLayerSeparationCtrlFileCreate
  • [[llExtractWithLayerSeparationCtrlFileCreateMyosin
  • [[llExtractWithLayerSeparationFilamentInfo
  • [[llExtractWithLayerSeparationResultTwoSubsetsByPhiAngle
  • [[llExtractWithLayerSeparationServer
  • [[llExtractWithLayerSeparationSingle
  • [[ltlg2mrc
  • [[ltlg2ps
  • [[ltlgDataInfo
  • [[mallocCheck
  • [[matrix3DEulerAngleTransform
  • [[matrix3DFromEulerAngle
  • [[matrix3DInverse
  • [[matrix3DToEulerAngle
  • [[miho2
  • [[moi2mrc
  • [[molecularEnvelopeResampling
  • [[molecularWeightCalc
  • [[molvie
  • [[molvieDock
  • [[molvieFlight
  • [[molvieMrcViewer
  • [[molvieProjection
  • [[molvieViewer
  • [[mrc2Dto3D
  • [[mrc2Dto3DforVariation
  • [[mrc2dsn6
  • [[mrc2fld
  • [[mrc2gif
  • [[mrc2hdf
  • [[mrc2lattice
  • [[mrc2map
  • [[mrc2pov
  • [[mrc2tiff
  • [[mrc2viff
  • [[mrc3DExtractZ
  • [[mrc3Dto2D
  • [[mrcFETnormalizeBySD
  • [[mrcFFTBandPassFilter
  • [[mrcFFTCTFCompensation
  • [[mrcFFTDigitize
  • [[mrcFFTExpression
  • [[mrcFFTFibreDiagram
  • [[mrcFFTFiltering
  • [[mrcFFTIQEstimation
  • [[mrcFFTInfo
  • [[mrcFFTLayerLineCheck
  • [[mrcFFTMedianFilter
  • [[mrcFFTProjection
  • [[mrcFFTResampling
  • [[mrcFFTShellInfo
  • [[mrcFFTSizeChange
  • [[mrcFFTSpectrum
  • [[mrcFFTXFiltering
  • [[mrcFFTplainreduce

mrcFTMeridianEquatorRedece mrcImage1DProjectionfrom2D mrcImage1dAverageByCorrelation mrcImage1dCutAverage mrcImage1dShiftAverageByAnnealing mrcImage1dShiftByCorrelation mrcImage2DBackProjection mrcImage2DProjection mrcImage2pdb mrcImage3DHighResoEmphasis mrcImage3DPad mrcImage3DPad2 mrcImage3DWindowing mrcImageAbnormalValueRemove mrcImageActinSingleParticleAnalysis mrcImageAdaptiveBinalization mrcImageAdd mrcImageAddValue mrcImageAreaCalc mrcImageAssignedToTFofPDB mrcImageAutoCorrelationWithWindowing mrcImageAutoFilamentExtract mrcImageAutoFilamentExtractResultAnalysis mrcImageAutoRotationCorrelation mrcImageAutoRotationCorrelation3D mrcImageAutoRotationCorrelationResultPrint mrcImageAverage mrcImageBandPassFilter mrcImageBinalization mrcImageBlockMerge mrcImageBoundaryInfo mrcImageBtest mrcImageCCDNoiseRemove mrcImageCTFCompensation mrcImageCTFCompensationForTiltImage mrcImageCTFDetermination mrcImageCTFObservation mrcImageCTFSN mrcImageCVE mrcImageCenterDensityChange mrcImageCenterGet mrcImageCenterOfMassCalculate mrcImageCircumferentialProjection mrcImageClusterAnalysis mrcImageColoring mrcImageColorlizing mrcImageCommonLineSearch mrcImageConnection mrcImageConnectivityNumberCalc mrcImageContourSurfaceCreate mrcImageCoordinateChange mrcImageCoreImageCalc mrcImageCorrelation mrcImageCorrelationInFourierSpace mrcImageCorrelationServer mrcImageCorrelationWithCTFCompensation mrcImageCrystalCreate mrcImageCutAndSetInArray mrcImageCylinderSection mrcImageDeadPixelCorrection mrcImageDensityChangeEstimation mrcImageDensityInfo mrcImageDensityNormalization mrcImageDensityNormalizationByImage mrcImageDevideIntoTwoImages mrcImageDisplayDensityAsTempFactor mrcImageDistanceConversion mrcImageDivideInfoForTomography mrcImageDivideIntoTwoImages mrcImageEdgeImageGet mrcImageEnhancementWithFuzzySets mrcImageEstimateTiltImage mrcImageExpression mrcImageFFT mrcImageFFTLayerLineExtraction mrcImageFOMCalc mrcImageFTest mrcImageFeatureExtraction mrcImageFilamentSearch mrcImageFilterCreate mrcImageFilteringbyFile mrcImageFilteringbyFileForVariance mrcImageFourierPowerSpectrum mrcImageFourierShellCorrelation mrcImageFractalFourierShellCorrelation mrcImageFractalFrourierShellCorrelation mrcImageGaussDisc mrcImageGaussSphere mrcImageHeaderChange mrcImageHelicalAveraging mrcImageHelicalMappingFrom2DImage mrcImageHelicalMasking mrcImageHelicalMaskingBy2DImage mrcImageHelicalProjection mrcImageHighPassFilter mrcImageHighlighting mrcImageInfo mrcImageInverseRadonTransform mrcImageLabeling mrcImageLowPassFilter mrcImageMagnificationChange mrcImageMake2DArrayImage mrcImageMakeCylinder mrcImageMakeDump mrcImageMakeFromTextFile mrcImageMakeSphere mrcImageMappingtoPdb mrcImageMasking mrcImageMaskingByImage mrcImageMergebyside mrcImageMirroring mrcImageModeChange mrcImageModelCreate mrcImageModelSubfilamentsCreate mrcImageMontageCreate mrcImageMove mrcImageMultiCTFCompensation mrcImageMultiCTFDetermination mrcImageMultiplying mrcImageMultiplyingbyFile mrcImageNeuralNetLearning mrcImageNeuralNetParticleExtraction mrcImageNeuralNetParticleLearning mrcImageNfoldAxisSearch mrcImageNoiseAdd mrcImageNoiseCreate mrcImageNoiseReductionByRelaxation mrcImageNormalDistributionTest mrcImageNormalizedSubstraction mrcImageNormalizedSubtraction mrcImageNormalizing mrcImageNullImageCreate mrcImageOddBoxel mrcImageOneLineSimilarityCalc mrcImageOrientationSearch mrcImageOrientationSearchByHigherSelection mrcImageOrientationSearchByHybridization mrcImageOrientationSearchBySimultaneousMinimization mrcImagePCA mrcImagePad mrcImagePhaseCTFCompensationFromCTFINFO mrcImagePixelDataGet mrcImagePolyROI mrcImagePosterization mrcImagePrint mrcImagePrint3D mrcImageProjection mrcImagePut3D mrcImageROI mrcImageROI3D mrcImageROIs mrcImageROItoPCAoutputImage mrcImageRadialDistribution mrcImageRadonTransform mrcImageRealValueAdd mrcImageRectangleGet mrcImageRectangleGetByCorrelation mrcImageRefConv2D mrcImageRefCreate mrcImageRefFFTConv2D mrcImageRefScaleChangeWithPad mrcImageResolutionEstimateForFilaments mrcImageReverse mrcImageRotation mrcImageRotation3D mrcImageSN mrcImageSamplingUnitChange mrcImageScalarAdd mrcImageSectionGet mrcImageSetFunction mrcImageShapePCA mrcImageShift mrcImageShiftFollowingGC mrcImageShrink mrcImageSimilarImageSearch mrcImageSimilarityEstimate mrcImageSinogramCorrelation mrcImageSinogramCreate mrcImageSinogramFFT mrcImageSmoothing mrcImageSolventFlattening mrcImageSphere mrcImageSplit mrcImageSquare mrcImageStack mrcImageStandardDeviation mrcImageSubstraction mrcImageSubtraction mrcImageSuperResolution mrcImageSymmetryAverage mrcImageSymmetryCentreFind mrcImageSymmetryFind mrcImageTTest mrcImageTfunction mrcImageTiltAxisSearch mrcImageToNAMDConstantForces mrcImageTrans mrcImageTransepose mrcImageTransformDescartesIntoPolar mrcImageTranspose mrcImageTwoImageTest mrcImageUnbentROI mrcImageUnexpectedMassFromPDB mrcImageUntwist mrcImageVarianceAnalysis mrcImageVarianceMap mrcImageVolumeCalc mrcImageWindowing mrcImageZPad mrcImagepdbFileReduce mrcImagesSinogramCorrelation mrcImagestoRef mrcInfo mrcInfoSet mrcManipulate_kaya mrcMask mrcMeanYlinePos mrcMirrorImageCreate mrcRadon2Dto3D mrcRefCorEstimate mrcRefCorModify mrcRefCoreGet mrcRefCorrelation mrcRefCorrelationConv mrcRefEstimate mrcRefFFTConvert mrcRefHeaderCreate mrcRefHighPassFilter mrcRefImageCorrelation mrcRefImageOmegaCorrelation mrcRefImagepwzCorEstimate mrcRefImagepwzCorModify mrcRefImagepwzCorPeakFind mrcRefImagepwzCorSmoothing mrcRefImagepwzCorrelation mrcRefImagepwzCorrelationByFFT mrcRefImagexaFit mrcRefLowPassFilter mrcRefNoiseAdd mrcRefNormalizing mrcRefPhaseImageCreate mrcRefSmoothing mrcRefz1ImageCorrelation mrcSinogramFET mrcSinogramFETcalcSDforNormalize mrcSinogramFETcalcWeight mrcSinogramFETcorrelationMap mrcSinogramFETnormalizedMap mrcSinogramFETreferredCorrelation mrcSinogramFETsmoothParameterMatching mrcView muscleSimulation myo nakamichi2009 obj3Don2DImageView openGLTest pdb2SketchMacro pdb2bender pdb2mrc pdb2mrc2d pdb2mrc2dWithCTF pdb2mrcWithCTF pdb2ucd pdb3DOn2DImageLayerView pdbAtomSection pdbCAOnly pdbChargeFit pdbCoordAdd pdbCrystalCreate pdbDisplay pdbFileMerge pdbHelix pdbHomologySearch pdbInfo pdbMatrixCreate pdbMolecularInterfaceFind pdbMove pdbNAMDRestraintCreate pdbNearAtomListShow pdbOneProteinGet pdbPCA pdbProteinIDSet pdbRhoFit pdbRhoFitCoiledCoil pdbRhoFitTm pdbRotation pdbSecondaryStructurePrint pdbShapeFit pdbSurface pdbTempFactorSet pdbTrans pdbTwoProteinFit pdbView pdbWaterAdd pgDataBaseSelectServer pgJournalSelect pgJournalSelectCORBAClient pgJournalSelectCORBAServer pgMemoSelectCORBAServer pgSelect pointAffineTransform psFileMerge psFilePageMerge randomNormalGet randomUniformGet rasmonyo reoleo ryuuhaku smolet tacyas takahiro test tgaInfo tiff2mrc tiltInfoDetermine vector2pdb vectorImageNearestNeighborMethod yajinori yamashita09 yoshinori