「mrcImageFourierShellCorrelation」の版間の差分
提供: Eospedia
(→実行例) |
|||
行14: | 行14: | ||
<tr> | <tr> | ||
<td>-i1</td> | <td>-i1</td> | ||
− | <td> | + | <td>選択</td> |
− | <td>入力[mrcImage]: 3D from one set</td> | + | <td>入力: [[mrcImage]]: 3D from one set</td> |
<td>NULL</td> | <td>NULL</td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
<td>-i2</td> | <td>-i2</td> | ||
− | <td> | + | <td>選択</td> |
− | <td>入力[mrcImage]: 3D from another set</td> | + | <td>入力: [[mrcImage]]: 3D from another set</td> |
<td>NULL</td> | <td>NULL</td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
<td>-d</td> | <td>-d</td> | ||
− | <td> | + | <td>選択</td> |
− | <td>入力: Delta [A-1]</td> | + | <td>入力: Delta [A-1] (Default 1/(Nx*size of pixel)</td> |
<td>0</td> | <td>0</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-z</td> | ||
+ | <td>選択</td> | ||
+ | <td>相関参照ファイルのzの位置(M=2のみ)</td> | ||
+ | <td>0</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-L</td> | ||
+ | <td>選択</td> | ||
+ | <td>Low threshold (m=+2で使用)</td> | ||
+ | <td>0</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-H</td> | ||
+ | <td>選択</td> | ||
+ | <td>High threshold (m=+2で使用)</td> | ||
+ | <td>0</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-I1</td> | ||
+ | <td>選択</td> | ||
+ | <td>InputDataFiles</td> | ||
+ | <td>stdin</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-c</td> | ||
+ | <td>選択</td> | ||
+ | <td>コンフィグファイル設定</td> | ||
+ | <td>NULL</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-m</td> | ||
+ | <td>選択</td> | ||
+ | <td>モードを設定</td> | ||
+ | <td>0</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>-h</td> | ||
+ | <td>選択</td> | ||
+ | <td>ヘルプを表示</td> | ||
+ | <td> </td> | ||
</tr> | </tr> | ||
</div> | </div> | ||
</table> | </table> | ||
− | === | + | ===-m の詳細=== |
<table border="1"> | <table border="1"> | ||
<div align="left"> | <div align="left"> | ||
行47: | 行89: | ||
<td>1</td> | <td>1</td> | ||
<td>Fourier Shell Phase Residual(FSPR)</td> | <td>Fourier Shell Phase Residual(FSPR)</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>+2</td> | ||
+ | <td>Correlation between L and H</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>+4</td> | ||
+ | <td>Without equator</td> | ||
</tr> | </tr> | ||
</div> | </div> | ||
</table> | </table> | ||
+ | |||
+ | ===-M の詳細=== | ||
+ | <table border="1"> | ||
+ | <tr> | ||
+ | <th>モード</th> | ||
+ | <th>説明</th> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>0</td> | ||
+ | <td>Correlation between same size images</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>1</td> | ||
+ | <td>Correlation between 2D image and image extracted from 3D image</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>+2</td> | ||
+ | <td>Correlation between 2D different size images. In1 is compared with center of In2</td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | |||
== 実行例 == | == 実行例 == |
2013年11月19日 (火) 07:57時点における版
mrcImageFourierShellCorrelationとはmrcImage型の三次元像の表示するためのEosのコマンドである。
アルゴリズム
オプション一覧
メインオプション
オプション | 必須項目/選択項目 | 説明 | デフォルト |
---|---|---|---|
-i1 | 選択 | 入力: mrcImage: 3D from one set | NULL |
-i2 | 選択 | 入力: mrcImage: 3D from another set | NULL |
-d | 選択 | 入力: Delta [A-1] (Default 1/(Nx*size of pixel) | 0 |
-z | 選択 | 相関参照ファイルのzの位置(M=2のみ) | 0 |
-L | 選択 | Low threshold (m=+2で使用) | 0 |
-H | 選択 | High threshold (m=+2で使用) | 0 |
-I1 | 選択 | InputDataFiles | stdin |
-c | 選択 | コンフィグファイル設定 | NULL |
-m | 選択 | モードを設定 | 0 |
-h | 選択 | ヘルプを表示 |
-m の詳細
モード | 説明 |
---|---|
0 | Fourier Shell Correlation(FSC) |
1 | Fourier Shell Phase Residual(FSPR) |
+2 | Correlation between L and H |
+4 | Without equator |
-M の詳細
モード | 説明 |
---|---|
0 | Correlation between same size images |
1 | Correlation between 2D image and image extracted from 3D image |
+2 | Correlation between 2D different size images. In1 is compared with center of In2 |
実行例
$ mrcImageFourierCorrealation -i1 aa1 -i2 aa2 -d 0.005 > aa.FSC