mrcImageFractalFourierShellCorrelation
mrcImageFractalFourierShellCorrelationとはEosのコマンドである。
目次
オプション一覧
メインオプション
オプション | 必須項目/選択項目 | 説明 | デフォルト |
---|---|---|---|
-i | 必須 | 入力ファイル: mrcImage | NULL |
-r | 必須 | 参照ファイル: mrcImage | NULL |
-o | 必須 | 出力ファイル: mrcImage(ResolutionMap) | NULL |
-t | 選択 | 閾値 | 0.5 |
-sx | 選択 | 入力: step x | 1 |
-sy | 選択 | 入力: step y | 1 |
-sz | 選択 | 入力: step z | 1 |
-maxN | 選択 | 入力: max partIn.HeaderN | 32 |
-scaling | 選択 | 入力: scaling up | 1.25 |
-get | 選択 | 入力: mrcPixelDataGetMode | 0 |
-Log | 選択 | 出力: ASCII(ログファイル) | NULL |
-xmin | 選択 | 入力: xmin | 0 |
-ymin | 選択 | 入力: ymin | 0 |
-zmin | 選択 | 入力: zmin | 0 |
-xmax | 選択 | 入力: xmin | 0 |
-ymax | 選択 | 入力: ymin | 0 |
-zmax | 選択 | 入力: zmin | 0 |
-d | 選択 | 密度の閾値 | 0 |
-c | 選択 | コンフィグファイル設定 | NULL |
-m | 選択 | モードを設定 | 0 |
-h | 選択 | ヘルプを表示 |
-get の詳細
モード | 説明 |
---|---|
0 | mrcPixelRePart |
1 | mrcPixelImPart |
2 | mrcPixelMag |
3 | mrcPixelPow |
4 | mrcPixelLogMag |
5 | mrcPixelLogPow |
6 | mrcPixelPhase |
モードの詳細
モード | 説明 |
---|---|
0 |
実行例
入力ファイルの画像
最小 最大 |
-18651.7 (10, 1, 0) 52942.7 (24, 39, 0) |
最小 最大 |
0 (0, 0, 0) 49749.7 (27, 28, 0) |
オプション必須項目のみの場合
最小 最大 |
0.0392157 (71, 72, 0) 0.181818 (48, 1, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.462561 correlation[3]=0.622899 resolution=0.066667 1/resolution=14.999999 x=0.000000 y=1.000000 z=0.000000 correlation[2]=0.661827 correlation[3]=0.488501 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.819262 correlation[3]=0.441376 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=3.000000 z=0.000000 correlation[2]=0.891178 correlation[3]=0.459959 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.729356 correlation[3]=0.444954 resolution=0.080000 1/resolution=12.500000 -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.983376 correlation[3]=-0.852664 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.988072 correlation[3]=-0.876375 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.990295 correlation[3]=-0.890379 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.991843 correlation[3]=-0.831177 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.990118 correlation[3]=-0.794613 resolution=0.153846 1/resolution=6.500000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=0.549983 correlation[3]=0.335905 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=76.000000 z=0.000000 correlation[2]=0.525744 correlation[3]=0.446922 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=77.000000 z=0.000000 correlation[2]=0.449682 correlation[3]=0.628217 resolution=0.068966 1/resolution=14.500000 x=79.000000 y=78.000000 z=0.000000 correlation[2]=0.381823 correlation[3]=0.660924 resolution=0.066667 1/resolution=14.999999 x=79.000000 y=79.000000 z=0.000000 correlation[2]=0.489003 correlation[3]=0.684696 resolution=0.064516 1/resolution=15.500000
オプション -t
t=0.9で実行
最小 最大 |
0.0322581 (68, 67, 0) 0.181818 (23, 12, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.925028 correlation[3]=0.867369 resolution=0.052632 1/resolution=19.000000 x=0.000000 y=1.000000 z=0.000000 correlation[2]=0.933414 correlation[3]=0.884678 resolution=0.052632 1/resolution=19.000000 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.926755 correlation[3]=0.850763 resolution=0.052632 1/resolution=19.000000 x=0.000000 y=3.000000 z=0.000000 correlation[2]=0.937130 correlation[3]=0.893916 resolution=0.052632 1/resolution=19.000000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.946488 correlation[3]=0.860230 resolution=0.052632 1/resolution=19.000000 -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.982904 correlation[3]=-0.821066 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.985052 correlation[3]=-0.841916 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.989819 correlation[3]=-0.864968 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.994007 correlation[3]=-0.843901 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.993258 correlation[3]=-0.806328 resolution=0.142857 1/resolution=7.000000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=0.921014 correlation[3]=0.733142 resolution=0.046512 1/resolution=21.500000 x=79.000000 y=76.000000 z=0.000000 correlation[2]=0.900781 correlation[3]=0.848712 resolution=0.054054 1/resolution=18.500000 x=79.000000 y=77.000000 z=0.000000 correlation[2]=0.977611 correlation[3]=0.882285 resolution=0.043478 1/resolution=23.000000 x=79.000000 y=78.000000 z=0.000000 correlation[2]=0.972994 correlation[3]=0.861809 resolution=0.043478 1/resolution=23.000000 x=79.000000 y=79.000000 z=0.000000 correlation[2]=0.909168 correlation[3]=0.862332 resolution=0.052632 1/resolution=19.000000
オプション -sx, -sy, -sz
sx=2, sy=2, sz=2で実行
最小 最大 |
0 (40, 0, 0) 0.181818 (24, 1, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.462561 correlation[3]=0.622899 resolution=0.066667 1/resolution=14.999999 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.533090 correlation[3]=-0.046960 resolution=0.090909 1/resolution=11.000000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.854290 correlation[3]=0.492443 resolution=0.074074 1/resolution=13.500000 x=0.000000 y=6.000000 z=0.000000 correlation[2]=0.482143 correlation[3]=0.642597 resolution=0.086957 1/resolution=11.500000 x=0.000000 y=8.000000 z=0.000000 correlation[2]=0.465505 correlation[3]=0.642583 resolution=0.090909 1/resolution=11.000000 -中略- x=38.000000 y=34.000000 z=0.000000 correlation[2]=0.982787 correlation[3]=-0.816140 resolution=0.166667 1/resolution=6.000000 x=38.000000 y=36.000000 z=0.000000 correlation[2]=0.973236 correlation[3]=-0.857385 resolution=0.166667 1/resolution=6.000000 x=38.000000 y=38.000000 z=0.000000 correlation[2]=0.989028 correlation[3]=-0.848348 resolution=0.166667 1/resolution=6.000000 x=38.000000 y=40.000000 z=0.000000 correlation[2]=0.990280 correlation[3]=-0.895764 resolution=0.166667 1/resolution=6.000000 x=38.000000 y=42.000000 z=0.000000 correlation[2]=0.994593 correlation[3]=-0.837716 resolution=0.166667 1/resolution=6.000000 -中略- x=78.000000 y=70.000000 z=0.000000 correlation[2]=0.252955 correlation[3]=0.615160 resolution=0.083333 1/resolution=12.000000 x=78.000000 y=72.000000 z=0.000000 correlation[2]=0.492885 correlation[3]=0.590087 resolution=0.080000 1/resolution=12.500000 x=78.000000 y=74.000000 z=0.000000 correlation[2]=0.376779 correlation[3]=0.560931 resolution=0.076923 1/resolution=13.000000 x=78.000000 y=76.000000 z=0.000000 correlation[2]=0.496387 correlation[3]=0.634083 resolution=0.068966 1/resolution=14.500000 x=78.000000 y=78.000000 z=0.000000 correlation[2]=0.384840 correlation[3]=0.708559 resolution=0.064516 1/resolution=15.500000
オプション -maxN
maxN=16で実行
最小 最大 |
0.0338983 (73, 68, 0) 0.181818 (34, 0, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.429053 correlation[3]=0.630336 resolution=0.057143 1/resolution=17.500000 x=0.000000 y=1.000000 z=0.000000 correlation[2]=0.478833 correlation[3]=0.282812 resolution=0.066667 1/resolution=14.999999 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.414865 correlation[3]=0.570600 resolution=0.060606 1/resolution=16.500000 x=0.000000 y=3.000000 z=0.000000 correlation[2]=0.667214 correlation[3]=-0.003384 resolution=0.083333 1/resolution=12.000000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.686127 correlation[3]=0.370139 resolution=0.083333 1/resolution=12.000000 -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.982904 correlation[3]=-0.821066 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.985052 correlation[3]=-0.841916 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.989819 correlation[3]=-0.864968 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.994007 correlation[3]=-0.843901 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.993258 correlation[3]=-0.806328 resolution=0.142857 1/resolution=7.000000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=0.686694 correlation[3]=0.485099 resolution=0.066667 1/resolution=14.999999 x=79.000000 y=76.000000 z=0.000000 correlation[2]=0.469409 correlation[3]=0.517023 resolution=0.058824 1/resolution=17.000000 x=79.000000 y=77.000000 z=0.000000 correlation[2]=0.506827 correlation[3]=0.407166 resolution=0.068966 1/resolution=14.500000 x=79.000000 y=78.000000 z=0.000000 correlation[2]=0.463276 correlation[3]=0.642259 resolution=0.058824 1/resolution=17.000000 x=79.000000 y=79.000000 z=0.000000 correlation[2]=0.647934 correlation[3]=0.486496 resolution=0.058824 1/resolution=17.000000
オプション -scaling
scaling=2.5で実行
最小 最大 |
0.0425532 (68, 51, 0) 0.181818 (48, 1, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.462561 correlation[3]=0.622899 resolution=0.066667 1/resolution=14.999999 x=0.000000 y=1.000000 z=0.000000 correlation[2]=0.661827 correlation[3]=0.488501 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.819262 correlation[3]=0.441376 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=3.000000 z=0.000000 correlation[2]=0.891178 correlation[3]=0.459959 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.729356 correlation[3]=0.444954 resolution=0.080000 1/resolution=12.500000 -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.982904 correlation[3]=-0.821066 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.985052 correlation[3]=-0.841916 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.989819 correlation[3]=-0.864968 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.994007 correlation[3]=-0.843901 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.993258 correlation[3]=-0.806328 resolution=0.142857 1/resolution=7.000000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=0.549983 correlation[3]=0.335905 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=76.000000 z=0.000000 correlation[2]=0.525744 correlation[3]=0.446922 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=77.000000 z=0.000000 correlation[2]=0.449682 correlation[3]=0.628217 resolution=0.068966 1/resolution=14.500000 x=79.000000 y=78.000000 z=0.000000 correlation[2]=0.381823 correlation[3]=0.660924 resolution=0.066667 1/resolution=14.999999 x=79.000000 y=79.000000 z=0.000000 correlation[2]=0.489003 correlation[3]=0.684696 resolution=0.064516 1/resolution=15.500000
オプション -xmin, xmax
xmin=10, xmax=50で実行
最小 最大 |
0 (0, 0, 0) 0.181818 (48, 1, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=1.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=2.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=3.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=4.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.983376 correlation[3]=-0.852664 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.988072 correlation[3]=-0.876375 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.990295 correlation[3]=-0.890379 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.991843 correlation[3]=-0.831177 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.990118 correlation[3]=-0.794613 resolution=0.153846 1/resolution=6.500000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=76.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=77.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=78.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=79.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing
オプション -ymin, -ymax
ymin=10, ymax=50で実行
最小 最大 |
0 (0, 0, 0) 0.181818 (7, 10, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=1.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=2.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=3.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=4.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.982904 correlation[3]=-0.821066 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.985052 correlation[3]=-0.841916 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.989819 correlation[3]=-0.864968 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.994007 correlation[3]=-0.843901 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.993258 correlation[3]=-0.806328 resolution=0.142857 1/resolution=7.000000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=76.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=77.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=78.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=79.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing
オプション -d
d=2000で実行
最小 最大 |
0 (0, 0, 0) 0.181818 (9, 13, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=1.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=2.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=3.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=0.000000 y=4.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.982904 correlation[3]=-0.821066 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.985052 correlation[3]=-0.841916 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.989819 correlation[3]=-0.864968 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.994007 correlation[3]=-0.843901 resolution=0.142857 1/resolution=7.000000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.993258 correlation[3]=-0.806328 resolution=0.142857 1/resolution=7.000000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=76.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=77.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=78.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing x=79.000000 y=79.000000 z=0.000000 correlation[2]=nothing correlation[3]=nothing resolution=0.000000 1/resolution=nothing
オプション -get
get=1で実行
最小 最大 |
0.0425532 (71, 72, 0) 0.181818 (48, 1, 0) |
x=0.000000 y=0.000000 z=0.000000 correlation[2]=0.462561 correlation[3]=0.622899 resolution=0.066667 1/resolution=14.999999 x=0.000000 y=1.000000 z=0.000000 correlation[2]=0.661827 correlation[3]=0.488501 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=2.000000 z=0.000000 correlation[2]=0.819262 correlation[3]=0.441376 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=3.000000 z=0.000000 correlation[2]=0.891178 correlation[3]=0.459959 resolution=0.068966 1/resolution=14.500000 x=0.000000 y=4.000000 z=0.000000 correlation[2]=0.729356 correlation[3]=0.444954 resolution=0.080000 1/resolution=12.500000 -中略- x=39.000000 y=37.000000 z=0.000000 correlation[2]=0.983376 correlation[3]=-0.852664 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=38.000000 z=0.000000 correlation[2]=0.988072 correlation[3]=-0.876375 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=39.000000 z=0.000000 correlation[2]=0.990295 correlation[3]=-0.890379 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=40.000000 z=0.000000 correlation[2]=0.991843 correlation[3]=-0.831177 resolution=0.153846 1/resolution=6.500000 x=39.000000 y=41.000000 z=0.000000 correlation[2]=0.990118 correlation[3]=-0.794613 resolution=0.153846 1/resolution=6.500000 -中略- x=79.000000 y=75.000000 z=0.000000 correlation[2]=0.549983 correlation[3]=0.335905 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=76.000000 z=0.000000 correlation[2]=0.525744 correlation[3]=0.446922 resolution=0.086957 1/resolution=11.500000 x=79.000000 y=77.000000 z=0.000000 correlation[2]=0.449682 correlation[3]=0.628217 resolution=0.068966 1/resolution=14.500000 x=79.000000 y=78.000000 z=0.000000 correlation[2]=0.381823 correlation[3]=0.660924 resolution=0.066667 1/resolution=14.999999 x=79.000000 y=79.000000 z=0.000000 correlation[2]=0.489003 correlation[3]=0.684696 resolution=0.064516 1/resolution=15.500000