mrcImageDensityNormalizationByImage

mrcImageDensityNormalizationByImage is Eos's Command that normalizes the density with reference to the image file.

List of option

Main option

Option	Essential/Optional	NULL	Default
-i	Essential	Input: mrcImage	NULL
-r	Essential	Reference: mrcImage	NULL
-o	Essential	Output: mrcImage	NULL
-O	Optional	Output: ASCII	stdout
-D	Optional	DataList to be used	stdout
-Cylinder	Optional	Cylinder Region: (CCenterX, CCenterY, CMinR, CMaxR)	(20, 20, 10, 20)
-testBG	Optional	SearchRegion: (tstBGMin, tstBGMax, tstBGDelta)	(-3, 3, 0.1)
-M	Optional	Fitting Mode	0
-m	Optional	Mode	0
-h	Optional	Help

-M details

Value	Description
0	Single Line
1	Single Line with Background/td>

-m details

Value	Description
1	Sigma!=1.0
2	Stdout
4	Reversed
8	Robust Test

Execution example

------Input file's image------

Min Max Mean SD SE

-65.0178 94.4699 4.85274 20.4635 0.255794

------Refernce file's image------

Min Max Mean SD SE

-37.8047 57.1575 2.49049 11.3587 0.141984

------Example of options only essential------

Min Max Mean SD SE

-32.2771 47.084 2.49049 10.1827 0.127283

------Option -O------

The following data is written to the specified file.

------Option -D------

The following data is written to the specified file.

------Option -Cylinder------

Case: CCenterX=10 CCenterY=10 CMinR=50 CMaxR=10

Min Max Mean SD SE

-31.6534 47.337 2.95179 10.1351 0.126689

------Option -M------

Case: M-0

Min Max Mean SD SE

-32.2771 47.084 2.49049 10.1827 0.127283

Case: M=1

Min Max Mean SD SE

-31.946 46.8266 2.56378 10.1071 0.126339