mrcImageMaskingByImage

From EosPedia
Jump to: navigation, search

mrcImageConvolution is Eos's Command that performs masking with convolution of 2 mrcImages.

List of option

Main option

Option Essential/Optional Description Default
-i Essential Input: mrcImage NULL
-M Optional Input: mrcImage(Mask file) NULL
-o Essential Output: mrcImage NULL
-v Optional ValueForCut: Real 0
-m Optional Mode 0
-I Optional Input: Array stdin
-h Optional Help  

-m details

Value Description
0 cut off values larger that CutValue.
1 cut off values smaller that CutValue.
2 multiplying mask image: equal to mrcImageMultiplyingbyFile
+16 Subtract the average of ROI from the density (with Floating)


Execution example

------Input file's image------

B120-2-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-65.0178

94.4699
4.85274
20.4635

0.255794

------Mask file's image------

Mask-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

0

1
0.345156
0.475419

0.00594274

------Option -m------

Case: m=0

Case: -v=0
Outdata-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-65.0178

55.7056
-0.491187
13.2508

0.165635

Case: -v=1
Outdata-m0v1-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-65.0178

94.4699
4.85274
20.4635

0.255794

*It is not mask, because max value of the mask file is 1.

Case: m=1

Case: -v=0
Outdata-m1-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-65.0178

94.4699
4.85274
20.4635

0.255794

*It is not mask, because min value of the mask file is 0.
Case: -v=1
Outdata-m1v1-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-45.4312

94.4699
5.34393
15.4248

0.192809

Case: m=2

Case: -v=0
Outdata-m2-mrcImageMaskingByImage.png

Min

Max
Mean
SD

SE

-45.4312

94.4699
5.34393
15.4248

0.192809