mrcImagePrint

mrcImagePrint is Eos's Command.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-o	Optional	Output: ps file	stdout
-H	Optional	High Threshold	0.0
-L	Optional	Low Threshold	1.0
-Section	Optional	[z|x|y]Section	z
-x	Optional	x section:(xMin, xMax)	(0, 0)
-y	Optional	y section:(yMin, yMax)	(0, 0)
-z	Optional	z section:(zMin, zMax)	(0, 0)
-S	Optional	Scale(Centre is Bottom Left): -S 1 := 1 mm/pixel	1.0
-AS	Optional	Scale(Centre is Bottom Left): -AS 1 := 1 mm/A (Real) or 1 mm/A-1 (Fourier Space)	1.0
-E	Optional	Enlargement(image center is center)	1.0
-center	Optional	Center of a printed image(in case of FT or N.x/2.0 in case of Image):(cx, cy)	(0.0, 0.0)
-C	Optional	Variable: ContourLevel	1.0 ...
-I	Optional	Black is High Density.
-A	Optional	HighThres=Mean-SD, LowThres=Mean+SD
-AC	Optional	Auto Contour(thresHigh <-> mean)	10
-PC	Optional	Peak Contour(thresHigh <-> (mean+thresHigh)/2	10
-AC2	Optional	Auto Contour2(thresHigh <-> thresLow)	10
-Y	Optional	Y-axis expanding	1
-RGB	Optional	Contour Color Mode: RGB:(Red, Green, Blue)	(0, 0, 0)
-RGBGradient	Optional	Contour Color GradientMode: RGB:(RedFirst, GreenFirst, BlueFirst, RedLast, GreenLast, BlueLast)	(0, 0, 0, 0, 0, 0)
-HSB	Optional	Contour Color Mode: HSB:(Hue, Saturation, Brightness)	(0, 0, 0)
-HSBGradient	Optional	Contour Color GradientMode: HSB:(HueFirst, SaturationFirst, BrightnessFirst, HueLast, SaturationLast, BrightnessLast)	(0, 0, 0, 0, 0, 0)
-LineColourRGB	Optional	Contour Color Mode: RGB:(LineRed, LineGreen, LineBlue)	(0, 0, 0)
-LineColourRGBGradient	Optional	Contour Color GradientMode: RGB:(LineRedFirst, LineGreenFirst, LineBlueFirst, LineRedLast, LineGreenLast, LineBlueLast)	(0, 0, 0, 0, 0, 0)
-LineColourHSB	Optional	Contour Color Mode: HSB:(LineHue, LineSaturation, LineBrightness)	(0, 0, 0)
-LineColourHSBGradient	Optional	Contour Color GradientMode: HSB:(LineHueFirst, LineSaturationFirst, LineBrightnessFirst, LineHueLast, LineSaturationLast, LineBrightnessLast)	(0, 0, 0, 0, 0, 0)
-LineChange	Optional	Contour Color Change	0.1
-LineWidthStart	Optional	Contour Line Width Start	0.1
-LineWidthStep	Optional	Contour Line Width Step	0.05
-ReverseOrder	Optional	Reverse Print Order
-Untwist	Optional	Untwist Angle [degree/A], example: (-13,28) = 0.4709576	0.0
-UpsideDown	Optional	Upside Down
-Centre	Optional	Image Centre is at the centre of paper.
-CircleRadius	Optional	Radius of circles in the case of imageCircles	0.5
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	49
-h	Optional	Help

				-C  option is stronger than -AC and -PC
				-PC option is stronger than -AC
					-AC: (i+1)*(max-maen)  /(AC+1) + mean 
					-PC: (i  )*(max+mean)/2)/AC     + (max+mean)/2
				-AS option is stronger than -S option
				The default value of -AS option is ignored.
				The default value of -S option is used.
				Both options are applied to y-axis.

-m details

Value	Description
1	ImageDensity
2	Contour(DiffrentLineWidth)
4	Contour(SameLineWidth)
8	BlackCircles
16	Scale
32	Centre Mark
16777216	Amplitude by AsciiFile
33554432	Log of Amplitude by AsciiFile
67108864	Phase by AsciiFile

Execution example

Input file's image

Min Max Mean SD SE

0 (0, 0, 0) 5 (34, 41, 36) 0.00471829 0.0933498 0.000162869

Example of options only essential

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Option -S

Case: S=2

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Option -H

Case: H=1, S=2

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Option -L

Case: L=1.5, S=2

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Option -Section

Case: Section=x, S=2

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Option -x, -y, -z

Case: x=(10, 50), y=(0, 40), z=(30, 50), S=2

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Option -AS

Case: AS=1

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Option -center

Case: center=(30, 30), S=2

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Option -I

Case: I, S=2

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Option -A

Case: A, S=2

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Option -Y

Case: Y=2

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Option -ReverseOrder

Case: ReverseOrder, S=2

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Option -untwist

Case: untwist=0.1, S=2

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Option -UpsideDown

Case: UpsideDown, S=2

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Option -Centre

Case: Centre, S=2

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Option -m

Case: m=1, S=2

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Case: m=17, S=2

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Case: m=2, C=(1, 2, 3), S=2

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Case: m=6, C=(1, 2, 3), S=2

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Case: m=10, C=(1, 2, 3), S=2

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Case: m=34, C=(1, 2, 3), S=2

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Case: m=62, C=(1, 2, 3), S=2

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Option -AC

Case: AC=3, m=62, S=2

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Option -PC

Case: PC=1, m=62, S=2

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Option -AC2

Case: AC2=4, m=62, S=2

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Option -CircleRadius

Case: CircleRadius=0.75, m=62, C=(1, 2, 3), S=2

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