Difference between revisions of "mrcImageSmoothing"
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(Created page with "'''mrcImageSmoothing''' is Eos's Command that performs Nonlinear smoothing mrcImage. == List of option == === Main option === <table border="1"> <div align=...") |
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| Line 26: | Line 26: | ||
<td>-sx</td> | <td>-sx</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>x of Kernel Size</td> |
<td>3</td> | <td>3</td> | ||
</tr> | </tr> | ||
| Line 32: | Line 32: | ||
<td>-sy</td> | <td>-sy</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>y of Kernel Size</td> |
<td>3</td> | <td>3</td> | ||
</tr> | </tr> | ||
| Line 38: | Line 38: | ||
<td>-sz</td> | <td>-sz</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>z of Kernel Size</td> |
<td>3</td> | <td>3</td> | ||
</tr> | </tr> | ||
| Line 44: | Line 44: | ||
<td>-r</td> | <td>-r</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>Radius of Kernel Size</td> |
<td>1</td> | <td>1</td> | ||
</tr> | </tr> | ||
| Line 50: | Line 50: | ||
<td>-sigma</td> | <td>-sigma</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td>Sigma (m= | + | <td>Sigma (For m=4)</td> |
<td>2.0</td> | <td>2.0</td> | ||
</tr> | </tr> | ||
| Line 74: | Line 74: | ||
<td>-M</td> | <td>-M</td> | ||
<td>Optional</td> | <td>Optional</td> | ||
| − | <td> | + | <td>Mode2</td> |
<td>0</td> | <td>0</td> | ||
</tr> | </tr> | ||
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</tr> | </tr> | ||
</div> | </div> | ||
| − | </table> | + | </table> |
===-m details=== | ===-m details=== | ||
Revision as of 05:04, 31 July 2014
mrcImageSmoothing is Eos's Command that performs Nonlinear smoothing mrcImage.
Contents
List of option
Main option
| Option | Essential/Optional | Description | Default |
|---|---|---|---|
| -i | Essential | Input名: mrcImage | NULL |
| -o | Optional | Output名: mrcImage | stdout(Standard output by default） |
| -sx | Optional | x of Kernel Size | 3 |
| -sy | Optional | y of Kernel Size | 3 |
| -sz | Optional | z of Kernel Size | 3 |
| -r | Optional | Radius of Kernel Size | 1 |
| -sigma | Optional | Sigma (For m=4) | 2.0 |
| -times | Optional | Repeat time | 1 |
| -c | Optional | ConfigurationFile | NULL |
| -m | Optional | Mode | 0 |
| -M | Optional | Mode2 | 0 |
| -h | Optional | Help |
-m details
| Value | Description |
|---|---|
| 1 | Median filter |
| 2 | Mean filter |
| 3 | Surface Fit filter |
| 4 | Lee-Sigma filter |
※Mode１はデフォルト＝０になっているが、Mode１の選択肢に
０は無いので、指定しなければエラーとなる。
０は無いので、指定しなければエラーとなる。
-M details
| Value | Description |
|---|---|
| 0 | 矩形: -sx, -sy, [-sz]の入力が必要 |
| 1 | 球体(m=1のみ対応): -rの入力が必要 |
Execution example
-h によるヘルプの例
$ mrcImageSmoothing -h
Usage: /home/people/tacyas/Eos/bin/X86LINUX64/mrcImageSmoothing
Options:
[-i[nput] In (NULL )] :Essential :InputDataFile
[-o[utput] Out (NULL )] :Essential :OutputDataFile
[-sx sx (3 )] :Optional :x of Kernel Size
[-sy sy (3 )] :Optional :y of Kernel Size
[-sz sz (3 )] :Optional :z of Kernel Size
[-r r (1 )] :Optional :Radius of Kernel Size
[-sigma sigma (2.0 )] :Optional :Sigma for Lee-Sigma
[-m[ode] mode (0 )] :Optional :Mode
[-M[ode2] mode2 (0 )] :Optional :Mode
[-c[onfig] configFile (NULL )] :Optional :ConfigurationFile
>>> Mode <<<<
1: Median filter
2: Mean filter
3: Surface Fit filter
4: Lee-Sigma filter
>>> Mode2 <<<<
0: Kernel is cube. : required argumnent: -sx, -sy, [-sz]
1: Kernel is sphere.(Only mode 1 supported) : required argumnent: -r
------Input file's image------
 |
Min Max |
-65.0178 94.4699 |
------Mode１の1～3での処理画像------
| Mode１:1 | ||||||
 |
Min Max |
-41.8721 65.9659 |
Mode２:0を選択 -sx=9,-sy=9に変更 |
 |
Min Max |
-54.6403 54.0815 |
| Mode２:1を選択 -r=5に変更 |
 |
Min Max |
-54.6403 55.7056 |
|||
| Mode１:2 | ||||||
 |
Min Max |
-41.8721 67.5276 |
Mode２:0を選択 -sx=9,-sy=9に変更 |
 |
Min Max |
-54.6403 54.0644 |
| Mode１:3 | ||||||
 |
Min Max |
-41.8721 83.4967 |
Mode２:0を選択 -sx=9,-sy=9に変更 |
 |
Min Max |
-54.6403 56.99 |
