ctfDeterminationFromPhaseComparison
From EosPedia
ctfDeterminationFromPhaseComparison is Eos's Command that determines CTF from Phase Comparison.
Contents
List of option
Main option
| Option | Essential/Optional | Description | Default |
|---|---|---|---|
| -i | Essential | Input: mrcImage(FFT) | NULL |
| -r | Essential | Reference: mrcImage(FFT) | NULL |
| -o | Essential | Output: ASCII | NULL |
| -kV | Optional | Acceleration voltage: [kV] | 200 |
| -Cs | Optional | Spherical aberration coefficient: [mm] | 2.1 |
| -df | Optional | Defocus[A]: (mindf, maxdf, deldf) | (0.0, 200000, 1000) |
| -AoverP | Optional | AoverP: [A]: (minAoverP, maxAoverP, delAoverP) | (0.0, 1.0, 0.01) |
| -Rmax | Optional | Max Spatial frequency: [/A] | 0.1 |
| -c | Optional | ConfigurationFile | NULL |
| -m | Optional | Mode | 0 |
| -h | Optional | Help |
Currently, no effect about -kV, -Cs, -df, and -AboveP.
-m details
| Value | Description |
|---|---|
| 0 |
Execution example
Input file image
 | Size Mode |
( 80, 80, 1) mrcComplexFloatFT |
Reference file image
 |
Size Mode |
( 80, 80, 1) mrcComplexFloatFT |
Case: Options only essential
Output
bunbo = 27020.787541 bunshi = 8814.005537 RESULT= 0.326194
Option -Rmax
Case: Rmax=0.5
Output
bunbo = 30553.044231 bunshi = 8684.154471 RESULT= 0.284232
