mrcImage1dShiftByCorrelation

mrcImage1dShiftByCorrelation is Eos's Command.

List of option

Main option

Option	Essential/Optional	Description	Default
-i	Essential	Input: mrcImage	NULL
-r	Essential	Reference: mrcImage	NULL
-range	Optional	Search range of shift.	0
-s	Essential	File to define position of signal: ASCII	NULL
-d	Optional	Spacing of molecule(Pixel)	1.0
-norm	Optional	Normalize before correlation
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-m details

Value	Description
0	Phase residual
1	Normal correlation

-s format

sigpos0  sigval0
sigpos1  sigval1
.
.

Execution example

Input file's image

Min Max Mean SD SE

-24564.9 (1, 0, 0) 1.12206e+06 (40, 0, 0) 577190 290698 22981.7

Reference file's image

Min Max Mean SD SE

9528.98 (1, 0, 0) 1.05166e+06 (41, 0, 0) 577032 281935 22288.9

-s data

0	1
1	1

Example of options only essential

Output

start1 
corstart
0 -0.0184223 
1 -0.0573648 
2 -0.0963073 
3 -0.13525 
4 -0.174192 

...

35 -1.38141 
36 -1.42035 
37 -1.45929 
38 -1.49824 
39 -1.53718 

...

75 -0.17629 
76 -0.137348 
77 -0.0984052 
78 -0.0594627 
79 -0.0205202 
Input-1VOM-N-1D.mrc Input-1VOM-1D.mrc 0.000000 -0.0184223

Option -range

Case: range=40

Output

start1 
corstart
0 -0.0184223 
1 -0.0573648 
2 -0.0963073 
3 -0.13525 
4 -0.174192  

...

35 -1.38141 
36 -1.42035 
37 -1.45929 
38 -1.49824 
39 -1.53718 
Input-1VOM-N-1D.mrc Input-1VOM-1D.mrc 0.000000 -0.0184223

Option -d

Case: d=0.5

Output

start1 
corstart
0 -0.0184223 
0.5 -0.0378935 
1 -0.0573648 
1.5 -0.076836 
2 -0.0963073 
2.5 -0.115779 
3 -0.13525 
3.5 -0.154721 
4 -0.174192 

...

35 -1.38141 
35.5 -1.40088 
36 -1.42035 
36.5 -1.43982 
37 -1.45929 
37.5 -1.47877 
38 -1.49824 
38.5 -1.51771 
39 -1.53718 
39.5 -1.55665 
Input-1VOM-N-1D.mrc Input-1VOM-1D.mrc 0.000000 -0.0184223

Option -norm

Output

0 -0.0371553 
1 -0.115694 
2 -0.194234 
3 -0.272774 
4 -0.351314 

...

75 -0.355545 
76 -0.277005 
77 -0.198465 
78 -0.119926 
79 -0.0413864 
Input-1VOM-N-1D.mrc Input-1VOM-1D.mrc 0.000000 -0.0371553

Option -m

Case: m=1

Output

start1 
corstart
0 0.999919 
1 0.999344 
2 0.998179 
3 0.996434 
4 0.994119 

...

75 0.993978 
76 0.996324 
77 0.9981 
78 0.999296 
79 0.999903 
Input-1VOM-N-1D.mrc Input-1VOM-1D.mrc 0.000000 0.999919