mrcImageMakeSphere
From EosPedia
mrcImageMakeSphere is Eos's Command that makes sphere or circle.
Contents
List of option
Main option
Option | Essential/Optional | Description | Default |
---|---|---|---|
-i | Essential | Input: mrcImage(Template file) | NULL |
-o | Essential | Output: mrcImage | NULL |
-C | Optional | Cetnter position of Sphere (Cx, Cy, Cz) | (0, 0, 0) |
-or | Essential | Outer Radius (pixel) | 1 |
-ir | Optional | Inner Radius (pixel) | 0 |
-r | Optional | Center Radius (pixel): For mode 1 only. | 0 |
-v | Optional | Value of sphere | 10.0 |
-Other | Optional | Other acceptors. For FRET Calculation. | NULL |
-c | Optional | ConfigurationFile | NULL |
-m | Optional | Mode | 0 |
-h | Optional | Help |
-m details
Value | Description |
---|---|
0 | Constant |
1 | Gaussian |
Execution example
Input file's image
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Min Max |
0 (0, 0, 0) 2 (35, 35, 5) |
Example of options only essential
Case: or=30
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Min Max |
0 (31, 0, 0) 310 (0, 0, 0) |
Option -C
Case: C=(35, 35, 50), or=30
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Min Max |
0 (0, 0, 0) 610 (35, 50, 0) |
Option -ir
Case: ir=15, C=(35, 35, 50), or=30
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Min Max |
0 (0, 0, 0) 510 (31, 34, 0) |
Option -v
Case: v=20, C=(35, 35, 50), or=30
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Min Max |
0 (0, 0, 0) 1220 (35, 50, 0) |
Option -m
Case: m=1, C=(35, 35, 50), or=30
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Min Max |
0.0246775 (0, 0, 0) 503.861 (31, 42, 0) |
Option -r
Case: r=5, m=1, C=(35, 35, 50), or=30
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Min Max |
2.86426 (0, 0, 0) 495.602 (35, 46, 0) |