mrcImageOddBoxel

mrcImageOddBoxel is Eos's Command.

List of option

Main option

Option	Essential/Optional	Description	Default
-I	Essential	Input: ASCII (mrcImage List)	stdin
-Iter	Optional	IterationFlag
-M	Optional	MolecularWeight (for iteration only)	1.0
-n	Optional	NumberOfMolecule (for iteration only)	1.0
-Boxel	Optional	Final volume for iteration uning boxel unit	0
-d	Optional	Density (for iteration only)	1.35
-I	Optional	Inverse (for iteration only)
-Abs	Optional	AbsoluteFlag
-Th	Optional	Threshold for calculation. (for iteration only)	0.0
-c	Optional	ConfigurationFile	NULL
-m	Optional	Mode	0
-h	Optional	Help

-m details

Value	Description
0

-i format

mrcFile1
mrcFile2
.
.
.

Execution example

Input file's data

/Eos/img/1VOM-40.mrc
/Eos/img/1VOM-45.mrc
/Eos/img/1VOM-50.mrc
/Eos/img/1VOM-55.mrc
/Eos/img/1VOM-60.mrc
/Eos/img/1VOM-65.mrc

1VOM-40.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3077.54 (41, 49, 0) 126.786 387.323 4.84154

1VOM-45.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3099.59 (17, 62, 0) 123.791 381.654 4.77068

1VOM-50.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3095.88 (33, 57, 0) 143.393 399.986 4.99982

1VOM-55.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3044.97 (51, 58, 0) 148.952 413.856 5.1732

1VOM-60.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3026.91 (50, 47, 0) 129.875 386.428 4.83035

1VOM-65.mrc's image

Min Max Mean SD SE

0 (0, 0, 0) 3308.47 (26, 42, 0) 105.169 351.901 4.39877

Example of options only essential

Depending on each input file, (Input file).score is output.

1VOM-40.mrc.score's image

Min Max Mean SD SE

-1.42114 (29, 17, 0) 2.04124 (2, 27, 0) -0.0197871 0.764218 0.00955272

1VOM-45.mrc.score's image

Min Max Mean SD SE

-1.83809 (22, 35, 0) 2.04124 (67, 51, 0) -0.0561763 0.700513 0.00875641

1VOM-50.mrc.score's image

Min Max Mean SD SE

-1.28819 (32, 47, 0) 2.04124 (51, 2, 0) 0.0365122 0.771584 0.0096448

1VOM-55.mrc.score's image

Min Max Mean SD SE

-1.56769 (31, 48, 0) 2.04124 (37, 5, 0) 0.0387604 0.787144 0.0098393

1VOM-60.mrc.score's image

Min Max Mean SD SE

-1.53558 (41, 52, 0) 2.04124 (57, 22, 0) 7.09678e-07 0.748489 0.00935612

1VOM-65.mrc.score's image

Min Max Mean SD SE

-1.62873 (22, 60, 0) 2.04124 (19, 3, 0) 0.000690029 0.82345 0.0102931

Option -Iter

1VOM-40.mrc.score's image

Min Max Mean SD SE

-0.851998 (56, 33, 0) 1.58332e+11 (14, 68, 0) 6.41423e+07 2.67338e+09 3.34173e+07

1VOM-65.mrc.score's image

Min Max Mean SD SE

-1.00711 (42, 62, 0) 5.4919e+11 (59, 58, 0) 1.60488e+08 8.09614e+09 1.01202e+08